Roseobacter litoralis: RLO149_c000020
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Entry
RLO149_c000020 CDS
T01572
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rli
Roseobacter litoralis
Pathway
rli03030
DNA replication
rli03430
Mismatch repair
rli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLO149_c000020 (dnaN)
03430 Mismatch repair
RLO149_c000020 (dnaN)
03440 Homologous recombination
RLO149_c000020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rli03032
]
RLO149_c000020 (dnaN)
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c000020 (dnaN)
Enzymes [BR:
rli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLO149_c000020 (dnaN)
DNA replication proteins [BR:
rli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RLO149_c000020 (dnaN)
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RLO149_c000020 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AEI92036
UniProt:
F7ZD28
LinkDB
All DBs
Position
1608..2726
Genome browser
AA seq
372 aa
AA seq
DB search
MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVSFRATDLDIEVVDKAPAQ
VERAGATTVSATTLHEIVRKLPDGALVTLTADSATGRLTVEAGRSNFSLATLPKEDFPVM
ATSEYQSNFSAKAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADAEGGRVLRCVATDGH
RLARIDADLPEDANDMPGVIVPRKTVGELRKLLDNDEMTIAVSVSETKVRFATPDITLTS
KVIDGTFPDYTRVIPQGNTRKLEVDAADFARAVDRVATVSSERSRAVKLQLDEDRLVLSV
NAPDSGAAEEELAVAYADERLEIGFNAKYLLEIASQVDRENAVFLFNSSGDPTLMREGND
LSAVYVVMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcatcgaacgcgcggccctgctcaaagcggtgtctcaggcacagtcggtt
gtggagcggcgcaacactatcccgattctggccaatgtgctgatcgaagccgaaggcagc
gacgtcagctttcgcgccaccgaccttgacatcgaagttgtcgacaaggcgcccgcacag
gtggaacgcgcaggcgcgacgaccgtttccgcgacgacattgcacgagatcgtgcgcaag
ttgccggatggcgcacttgtgacgttgaccgccgatagcgcaacgggccgcctgacggtt
gaggccggacggtcaaacttttcgctggcgacactgcccaaagaagacttcccagtgatg
gccacgtctgagtatcagtcgaatttttccgcaaaagcacctgtgctgcggcgtcttttt
gacaagtcgaagtttgcgatctctaccgaagagacgcggtactatctgaatggcgtctac
atgcatgtagctgatgcggagggcgggcgtgttttgcgctgcgtggcaaccgacggacac
aggctggcgcgcattgatgcggacctgccagaggacgccaacgatatgccgggcgtgatc
gtcccgcgcaaaacggtcggagagttgcgcaaactgctcgacaacgacgaaatgacgatt
gcggtctctgtgtcggaaaccaaagtgcgctttgcaacgcccgacattaccctgacgtcc
aaggtgatcgacgggaccttccctgattacacgcgggtcattccgcagggcaacacgcgc
aagcttgaagtggatgcggcggattttgcccgtgccgtggaccgggtggcgacggtaagt
tctgaacgctcgcgggcggtcaagctgcagttggacgaagaccggctggtcctttccgtt
aacgcgccagacagtggtgccgccgaagaggaactggccgtggcttacgccgatgaacgg
ctggagatcgggtttaacgcgaaatacctgctggaaattgccagtcaggttgatcgcgaa
aatgctgtctttctgttcaattcatcaggtgatccgacattgatgcgggagggcaacgat
ctgtctgccgtttatgtcgtcatgccgatgcgcgtctga
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