Rickettsia monacensis: RMONA_02990
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Entry
RMONA_02990 CDS
T03824
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rmc
Rickettsia monacensis
Pathway
rmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RMONA_02990 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmc03021
]
RMONA_02990 (rpoB)
03400 DNA repair and recombination proteins [BR:
rmc03400
]
RMONA_02990 (rpoB)
Enzymes [BR:
rmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RMONA_02990 (rpoB)
Transcription machinery [BR:
rmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RMONA_02990 (rpoB)
DNA repair and recombination proteins [BR:
rmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RMONA_02990 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
CEO16996
UniProt:
A0A0B7IYT9
LinkDB
All DBs
Position
497129..501244
Genome browser
AA seq
1371 aa
AA seq
DB search
MVSLRDNIEAQPLSHNRRIRKNFGHINLVADIPNLIEIQKNSYEKNFLQLNIKDSERKNK
GLQSILNSIFPISDSSNIANLEFVKYEFDTPKYDVEECSQRSLSYAAPLKVTLRLSIWDI
DEDTGAREIKGIKEQEVYMGDIPLMTKNGTFIINGTERVVVSQMHRSPGVFFYHDEGKVH
SSGKLLYSARVIPYRGSWLDLEFDAKDVIYFRIDRKRKLYATTLLRAIGMSTEEIIKFYY
NSVTYKLVKNKGWAVKFIPQHITTHRLTSDLVDADTGNVLLKAGQKITPRLAKKYFGEGL
NNILVAHETLIGKYLSEDLRDPASDEVLAKIGEMITADMLNVINDLKIKNVNVLVINPQS
GPYIRNTLFADKNQDREAALCDIFRVLRPGEPANIEAAESLFYNLFFDAERYDLSEVGRI
KMNSRLELNISEEVTVLTIDDIKNIVRVLVELKDGKGIIDDIDHLGNRRVRSVGELIENQ
FRIGLVRMEKSVIERMSAGDVDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSE
ITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINK
HGFIESPYRRVKNGHVTDEVVYLSAIEEGKYKIGQANSKVDKDGKLQGEFINCRVEGGNF
VMVEPHEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPFVGT
GVEGVVAKDSGASVLALHDGIVEQVDSNRIVIRTLEQKVDGSPSVDIYNLLKFQKSNHNT
CINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIV
KEDVFTSIHIEEFEVIARDTRLGPEEITRDIPNVSEEALRHLDEVGIIYVGAEVKAGDIL
VGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLYVPSGVSGTVVEVRVFSRRGVEKDQ
RAIAIEKQQIEKLAKDRDDELEIIEHFVFSWLEKLLVGQVIINGPKQVKAGQTITSEMLK
GLSKGQFWQLTVEDANVMNEIEQIKTHYDEKKDALDKRLATKVEKLQSGDDLPQGALKVV
KVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLENGTVIDIVLNPLGLPSRMNIG
QILETHLGWASINLAKKISELVKEYKNKHIGIEQIKKFLLELYGENINYILERSEEEIIS
FCNKVSKGVHFATPVFDGAKVQDVKDMLKLAGQDPSGQVKLIDGRTGEYFDRLVTVGQKY
LLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEML
TVKSDDVNGRIKTYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVT
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaagggataatatagaagcacaacccttgtcacataatagaagaataaga
aaaaatttcggtcacataaatttagtagcagatataccgaatttgattgaaattcaaaaa
aattcatatgaaaaaaactttctacagttaaatattaaagattctgaaagaaaaaacaaa
ggtttacaatctatattaaactcaatttttcctatttcagattcctccaatattgctaat
ttagaatttgtaaaatatgaattcgatactccaaaatatgatgtagaagagtgtagtcaa
agaagtttaagttatgctgctcctcttaaagttactttaagattaagtatttgggatata
gatgaggataccggtgctagagaaattaaagggattaaagagcaagaagtatatatgggt
gatatcccattaatgactaaaaacggtacttttattatcaacggtacggaaagagtagtt
gtatcacaaatgcatcgctcacctggcgtgttcttttatcatgatgaaggaaaagttcac
tcttccggcaagcttttatattctgctcgtgttattccatatagagggtcttggcttgat
ttagaatttgacgctaaggatgttatttatttcaggattgatagaaaaagaaagctttat
gctactactttgcttagagctataggtatgagtactgaagaaattataaaattttattat
aattcagtaacttataagcttgttaaaaataaaggttgggcggttaaatttatacctcag
catattactactcatcgtttaacaagtgatttagtagatgcagataccggaaatgttcta
ctgaaagcaggacaaaaaattaccccacgtttggctaaaaaatattttggggaagggctt
aataatattttagtagctcatgaaactttaatcggcaaatatctatccgaagatttaaga
gatcctgcaagcgatgaagtattagcaaaaatcggtgaaatgattactgctgatatgtta
aatgttattaatgatcttaaaattaaaaatgttaacgtattagtaatcaatcctcaatcc
ggtccatatataaggaacaccttatttgctgataaaaatcaggatcgcgaggcagcatta
tgtgacattttcagagttttaagaccgggcgaacctgctaatatcgaagcggctgaaagc
ctgttttataatttattctttgatgcggaaagatatgatctttcagaagtcgggcgaata
aaaatgaattctaggttagagctgaatatttctgaagaagttacggttttaacaattgat
gatattaaaaatatcgtaagagttttagtagagcttaaagacggtaaaggtatcatagac
gatattgatcatttaggtaatagaagggttagatcggtaggtgaattgatagaaaatcaa
tttagaataggtttagtccgaatggaaaaatctgtaattgaaaggatgtcggcaggtgat
gttgataccgtaatgcctcatgatttagtaaattctaaaattttagtttcagtagtaaaa
gaattttttagtacctcccaattatcccaatttatggatcaaacaaatccattatcggaa
ataactcataaaagaaggctgtcggcactcggacctggaggtcttagtcgagatcgagca
ggttttgaggtgcgtgacgtacatccaactcattacggtcgtatttgtcctattgaaaca
cctgaaggtcagaatatcgggttaattaactctatggctacttatgctagaataaataaa
cacggttttatagagagtccgtatagaagagttaaaaatgggcatgtaaccgatgaagtg
gtatatctttctgctattgaagaaggtaaatacaaaatcggacaagcaaattctaaagtt
gataaagacggaaagctgcaaggagagtttattaattgccgagttgaaggcggtaatttt
gtaatggtagaaccgcatgaggtagatttcattgatgtgactcctatgcaggtagtatcg
gttgcggcttctcttatacctttcttagaaaacgatgatgctaaccgtgctttgatgggt
tcaaacatgcaaagacaagccgttcctttaattaaaacggatgcaccttttgtaggtacc
ggagttgaaggggtagtagctaaagattccggagcgtcagtgcttgcattacatgacggt
attgttgagcaggtagattcaaatagaatcgtgattagaactctagaacaaaaagttgac
ggttctccttcggttgatatttataatttattaaaattccaaaaatccaatcataatact
tgtataaatcaaaagcctttagttaaggtcggtcattacgttaagaaaaacgatattata
gctgacggtcctagtacggataacggtgaaattgctttaggtagaaacgtgcttgtggct
ttcttaccttggaacggttataattttgaagattcaattttaatatccgaacgtatagta
aaagaggatgtatttacatcaattcatattgaagagtttgaagtaatagctagagataca
cgccttggtcctgaagaaattacccgtgatataccgaatgtaagtgaagaagcattacgt
catcttgatgaggtcggaataatttatgtaggtgcagaagtaaaagccggtgatatttta
gtcggaaaagtaacaccgaaaagtgaatcgcctattactcctgaagagaagctactacgt
gctatttttggggaaaaagcttttgacgtaaaagattcatcgctgtatgtaccttccgga
gttagcggaactgtagtagaagtaagggtattttctcgtagaggtgtagaaaaagaccag
cgagctattgctattgaaaaacaacaaattgaaaaattagcaaaagacagagacgacgaa
ttagaaattattgagcattttgtgtttagttggcttgaaaagcttttagtagggcaggtg
attattaatggtcctaagcaagtaaaagcaggacaaacaattactagtgaaatgctaaaa
ggtttatctaaagggcaattttggcagcttaccgtggaagatgcaaatgtaatgaatgaa
atagagcagataaagactcattatgatgagaaaaaagatgccctcgataaaagactcgct
actaaagtagagaaattgcaaagcggtgatgatttacctcagggagctttaaaagtagta
aaagtatttattgcaactaagcataaattacagcccggggataagatggcaggaagacac
ggaaataaaggtgttatttcacgtatcgtacctgaagaagatatgccatttttagaaaat
ggaactgtaatagatatcgttcttaaccctctaggtcttccgtcacgtatgaatatagga
cagattttagaaacgcatcttgggtgggcatcaataaatttagcaaaaaaaatatccgaa
ttagtcaaggaatataaaaataagcatataggtattgagcagattaagaaattcttactt
gagctatacggagagaatattaattatatacttgaaagatcggaagaagagattatctct
ttctgtaataaagtaagtaaaggcgtacattttgcaactcctgtatttgacggagcaaaa
gttcaggacgttaaagatatgctaaaacttgccggtcaagatccttcaggacaagtgaaa
ttaattgacggtagaaccggtgaatattttgaccgtctagtaaccgtcggacagaaatat
ttgctgaaattgcatcatttagtcgataataaaattcactcccgttctataggaccttat
agcttagtaacgcagcaaccgcttggaggtaagtctcatttcggtggacagcgtttcggg
gaaatggaatgttgggcattacaagcttacggtgcagcttatacgttacaggaaatgtta
acggttaagtcggatgacgtaaacggtaggatcaaaacttatgattctatagtacgcggt
gaaaataattttgaatcaggcattcctgaatcatttaatgttatgataaaagaatttaga
tctttatgtcttaacgtaaagcttgaagtaacttag
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