Rhopalosiphum maidis (corn leaf aphid): 113547991
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Entry
113547991 CDS
T06065
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113547991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113547991
03016 Transfer RNA biogenesis [BR:
rmd03016
]
113547991
Enzymes [BR:
rmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113547991
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113547991
Transfer RNA biogenesis [BR:
rmd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113547991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
Polbeta
Motif
Other DBs
NCBI-GeneID:
113547991
NCBI-ProteinID:
XP_026804404
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All DBs
Position
4:complement(30822288..30827317)
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AA seq
594 aa
AA seq
DB search
MDPQIGWLQPEQVGPAQEFWSRILDSSEDTDSDDKYSTETVQEEEDDDKYTLPLDWKFDF
SIDEQEIKTNNLYEQGLFTNIASTYDMNKMQAHYIGKFGGCPWRHGKSYDRQPICTLHKE
IEDFFAYMSATPEEHSMRLDVLERVTNVIHAEWPKAKVEVFGSFRTGLYLPTSDMDLVVI
GEWDTLPLHSLAQALLKNSVCNENIQVLDKASVPIVKMTDKATDVRVDISFNMNNGVKSA
EMIKHYMDVFPMLPKLVLVLKQFLAQRDMNEVFYGGISSYSLILMVVSFLQLHPRGDLNY
PTANLGVLLIEFFELYGKKFNYMHTAIRVKDGGQYISKDEVQKDMADGHRPSILCIEDPL
TPGNDIGRGSYGALQVKSVFEYAFTTLKAALDPQIVSPSFSILGRIVRVNDKVILYRQWV
RDTYALQNTQRVIINNYLTTSNISNNVSVSTTTSSRASTVSSGSGSAESDSESSIEKLSD
AGDHNDQNSNYQPRRKNPHYHRHNSWNNQQNYQMINTGNHPPTRTQRIICTSPANNYQHR
GFTNNNYNNNYNHHQNYRPNTGNKHQYTGNYQPHFGNLMSHKRQKRKNQTQDVR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcagataggttggctgcaaccagaacaagtaggtcccgctcaagaattttgg
tccagaattttggactcctctgaagataccgacagtgacgataaatatagtactgaaact
gttcaagaggaagaagacgacgacaaatatacgttgccattggattggaagtttgatttt
tctatagacgaacaagaaatcaagactaataatctatatgagcaaggcttgttcacaaac
atagccagtacatacgacatgaacaaaatgcaagcacattacattggcaaatttggtggg
tgtccatggagacatggaaagagttatgaccgccaaccaatttgcacactccataaagag
atagaagacttttttgcgtatatgtcagccacaccagaagagcatagcatgcggcttgat
gtactggaacgtgttaccaatgttatacatgctgaatggcctaaagctaaagttgaagta
tttggtagttttcgaacaggactttatttacccactagcgatatggatctagtagttata
ggtgaatgggatacgttaccattgcattcacttgctcaagctctacttaaaaatagtgtc
tgtaacgaaaacattcaagttcttgacaaagcatcggttccaatcgttaaaatgacagat
aaggctactgatgttagagtggatattagttttaacatgaataatggtgttaaatcagct
gaaatgataaaacactatatggatgtttttccaatgcttcctaaacttgtattagtgttg
aaacaatttttagcccagagggacatgaatgaagtgttctatggaggtatatcttcttac
agtttgatccttatggtcgtcagttttttacagttacatcctagaggagatttaaattat
cccactgccaatctaggtgtattgttaatagagttctttgaactttatggcaaaaaattt
aactatatgcatacagctatacgtgtgaaagatggtggacaatacatatctaaagacgaa
gtccaaaaagacatggctgatggtcataggccaagtattttatgtatagaggatccatta
actcctggaaacgatattggccgtggttcttatggtgctcttcaagtaaaaagtgtattt
gaatatgcatttactacattaaaagctgccctcgacccccaaattgtttcacctagtttt
agtatacttggacgaatagtacgagttaatgacaaagttatactttaccggcagtgggtt
agagatacttatgccttacaaaatactcaaagagtgataattaataattatttgaccact
agtaatattagtaacaatgttagtgtgtctacaactactagtagtagagcttctacagta
tcttctggttctggatcagctgaatctgattctgagagtagtatagaaaaattaagtgat
gctggtgaccacaatgatcagaatagtaattaccaacccagacgtaaaaatccacattat
catagacataatagttggaataatcaacagaattatcaaatgattaacactggtaatcac
ccacctacacgtactcaaaggataatatgcactagtccagctaataattaccaacatcgt
ggttttacaaacaacaattataataataattataaccaccatcaaaactaccggccaaac
acgggaaataaacaccagtatacgggaaattaccaaccacattttggtaatttaatgtca
cacaaacggcaaaaacgaaaaaaccaaacccaagatgtaagataa
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