Rhopalosiphum maidis (corn leaf aphid): 113553253
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Entry
113553253 CDS
T06065
Name
(RefSeq) X-ray repair cross-complementing protein 6-like
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113553253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113553253
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113553253
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113553253
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
113553253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Rep3_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
113553253
NCBI-ProteinID:
XP_026812279
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All DBs
Position
2:complement(8235436..8238371)
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AA seq
544 aa
AA seq
DB search
MEDLSDSPIVWESESFEEEKQKWFVKQHIMFLIDASKPMFNTYDNTTFFATSITLCKKVV
LKLIRESRNDKIGILIYGTDDDNRKCPKYINALSEPIKPNIQLIKKLDDILTSKPIQTGQ
SPLSPLSDAIWYGNYLIKKFSENQSYSTIMLITCNDRPEIGDSKKQFHLRTRIDDVIKNN
IDFKLIPIGTAFNMNLFYEGLLKNFNSISKPMKGLKSIDDIMLEINEKLKHGRSVSKIKF
YINNDYYISTSLFRFYSKSKIPSKVRLDKRTNKPLTSNTQVFTIENDELIHKSDQAKYLV
LADKRIIFKNEDLAILKSGILEPGIRLLGFTNKENIMISYHFKTPIFLRPNSDVDIGGTR
MFNSLIECCLEKNKYIMCFLKIRKGGKVHLSTLIPQDEVIDETGTQKQPSGFHVIFLPFN
ECLKPVKPIEQTEDDEFLTSTQELLGMKICESMPINYYPSLIKNPKINFHWAMLESLALE
SEMPDILDETLPANDVFDKNLSTIKNDIYEHLLPHVSSLPKTNKKSDMNSQNFNGKGKKR
KILQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttatcagattctccaattgtatgggaaagtgaatcttttgaagaagaaaaa
caaaaatggtttgtaaaacaacatattatgtttttaattgatgcttcaaaaccaatgttc
aatacttatgataatacaactttttttgcaactagtattacactttgcaaaaaagtagtt
ctgaaactaattagagagagcagaaatgataaaataggtatattgatatacggtacagac
gatgataatagaaaatgtcccaaatatattaatgcgttatctgaaccaataaaacctaat
attcaattaattaaaaagctcgatgatatattaacaagtaaacctattcaaactggacaa
tctccgttgtcacctctatcagacgcaatatggtatggtaactatcttataaaaaaattt
agtgaaaatcaaagctatagtactattatgctcattacatgcaatgaccgacccgaaatt
ggcgattctaaaaagcaatttcatctaagaacaagaattgatgatgttattaaaaataat
attgattttaaacttatacctattggtacagcatttaacatgaaccttttctatgaaggt
ctcctcaagaactttaacagtatttctaaacccatgaaggggctaaaaagtatagatgat
attatgttggaaatcaatgaaaaattaaaacacggtagaagtgtatccaaaataaaattc
tatattaataatgactattatatatctacatcattgtttagattttattcaaaatctaaa
ataccatcaaaagtcaggctggacaagagaactaataagcctttgactagtaatactcaa
gtatttacaatagaaaatgatgaattaatccataaatctgatcaagctaaatatttagtg
ttagcagataaaagaataatatttaaaaacgaagatttagcaattctaaaaagtggcatt
ctagaacctggtattagattacttggttttacaaataaagaaaatattatgatatcgtat
cattttaaaactcccatatttcttcggcctaatagtgatgtagacataggtggcacgcgt
atgtttaattctcttattgaatgctgcttggagaaaaataaatatattatgtgcttcttg
aaaattcggaaaggaggaaaggttcatttatctaccctgatacctcaagacgaagttata
gatgaaactggtactcaaaaacagccatcaggatttcatgttatatttcttccatttaat
gaatgtttgaaaccagtaaaacctatagaacaaacagaagatgatgaatttttgacgagt
acacaagaattactaggcatgaaaatatgtgaaagtatgcctatcaattattatccatca
ctgatcaagaaccctaaaatcaactttcattgggcaatgttagaatccttagcattggaa
tcagaaatgccagacattttagatgaaacacttccagcaaatgatgtttttgataaaaat
ttaagtacaataaaaaatgatatttatgaacatcttttgccacatgtttctagcctacca
aagacaaataaaaaatccgatatgaatagtcaaaattttaatggaaaaggaaagaaaaga
aaaattttgcagtaa
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