Rhopalosiphum maidis (corn leaf aphid): 113559310
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Entry
113559310 CDS
T06065
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113559310
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmd01002
]
113559310
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113559310
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113559310
Enzymes [BR:
rmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113559310
Peptidases and inhibitors [BR:
rmd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113559310
Ubiquitin system [BR:
rmd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113559310
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113559310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113559310
NCBI-ProteinID:
XP_026820786
LinkDB
All DBs
Position
4:45694202..45699572
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AA seq
651 aa
AA seq
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MTVLSSAETAEQPPRKKLCLSASRQLQSKSYALSQLNPMASPLDQPVIRHIKQQQQLQQQ
QQQQQINCSCDNESNGSPGVATLCNLGNTCFLNSVLYTLRFAPSFLHNLHHLITELQEIT
GRSTNGLKGKCSSLGRSTSSVSSKMWNFQSSLNVSMNDLKIIQVTERLHQVFEALHNCEL
KDNSDPYQPEVFLQSLRDVNPIFEGNQQHDAHELLVCLLDNIREGCKLIMQHSAQVNCFV
APAPVIQPVAPNKLKKFSGQVRKSLKIASSSKTRPVNGIVPPNVNITSDKVVLPENDNFA
DDKQMYVVNGTTNAVQSDENESIPSGSSNSSSSTSMFDDFQGVSLLRTTCLECEFVTERK
ESFCDICVPINGLTNGDISPENEFNPYDYDNVNKLYHSAIVTEEYLQDTDKYWCEQCCRY
NEAKRSVGYESLPRLLTLHLKRFCTNYRAVVSKVNEHMPTPLTLECFCEECLSLNSQQQT
RAHSYQLYAIIMHLGATIASGHYVAYVKAQDNLDEYINCPRDRRKTGSLSVTPNGTLPAN
YKKSSISNGLFRFLKISSKTSSGAPNSQSSDSIDDSGKVSSIGRWCRSLECCGVRILDNS
EGGDSVWLECDDETVRTMSVAQLTQILESKSSKNSALTPYLLFYVKVNRSE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttatcgtcagcagagacagctgaacagccaccacgcaagaagttgtgttta
tcagcatccaggcaactacaatctaaatcctatgcactctctcaacttaacccgatggca
tcacctcttgatcagcctgttatccggcatatcaagcaacagcaacaactacaacagcaa
caacagcagcagcaaattaactgttcttgtgacaatgaaagcaatggatcccctggtgtg
gcaactttatgcaatcttggtaacacttgttttctaaatagtgttttatacacattgcga
tttgcaccttcatttttgcacaatcttcatcacctaatcactgagttacaagagatcact
gggcggtcgaccaatggactcaagggaaaatgctcttctctgggtagaagtactagctca
gttagcagcaaaatgtggaactttcaatcatcattaaatgttagtatgaatgatctaaaa
attatacaagttactgaacgtcttcatcaagtatttgaagcattacataattgtgagctc
aaagataattcagatccatatcaacctgaagtatttttgcaatctttaagagatgtcaat
ccaatttttgaaggaaatcaacaacatgatgcccatgaactacttgtctgtttgttagat
aatattcgagaaggatgtaaattaatcatgcagcattctgctcaagtaaattgttttgtt
gcacctgctccagttattcaacctgttgcacctaataaattgaaaaaattttccggacaa
gtacgaaaatctttaaaaattgcatccagtagtaaaacacgaccagtcaatggcattgtt
ccgcccaatgttaatattactagtgataaagtggttttacccgaaaatgacaattttgct
gatgataaacaaatgtatgtagttaatggaactacaaatgcagttcaatctgatgaaaat
gaaagcattcctagtggcagcagtaatagtagtagtagtacatcaatgtttgatgatttc
caaggtgtatccttacttcgtaccacatgtttagaatgtgaatttgttacagaacggaaa
gagagtttttgtgacatctgtgttcctataaatggtttaactaatggagacatatcacct
gaaaatgaattcaacccatatgattatgacaatgtaaacaaattatatcattctgcaata
gtaactgaagaatatttacaagacactgataaatattggtgtgaacagtgttgtcgatat
aatgaagctaaacgaagtgttggatatgaaagtttacctcgattgttgacattacattta
aaacgattttgcaccaactatagagctgttgtgtcaaaagtaaatgaacatatgccaact
cctttaacattggagtgtttttgtgaagagtgtttatctctcaattcacaacaacaaact
cgagcacatagttaccagctgtacgccataataatgcatttgggtgctacaattgcttct
gggcattatgttgcatacgttaaggctcaggacaatcttgacgagtatatcaactgtcct
cgtgatcgacgcaagactggaagtctctcagtcacacccaatggtactttaccagcaaat
tataaaaaatcatcaatttcaaatggtctttttcgatttctaaaaatatcttcgaaaaca
tcttctggtgctcctaatagtcaatcaagtgattccattgatgattcgggaaaagtttct
tcgataggacggtggtgccgtagtctagaatgttgtggagttagaatattagataactca
gaaggtggagatagtgtgtggttagagtgtgatgacgaaacagtaagaactatgtcggtt
gcacaattaacacaaattttagaatccaaatcatccaagaactcagcattaactccgtat
ttattattttatgttaaagtgaaccgcagtgaataa
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