Rickettsia massiliae MTU5: RMA_1149
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Entry
RMA_1149 CDS
T00605
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rms
Rickettsia massiliae MTU5
Pathway
rms03030
DNA replication
rms03430
Mismatch repair
rms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RMA_1149 (dnaQ)
03430 Mismatch repair
RMA_1149 (dnaQ)
03440 Homologous recombination
RMA_1149 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rms03032
]
RMA_1149 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rms03400
]
RMA_1149 (dnaQ)
Enzymes [BR:
rms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RMA_1149 (dnaQ)
DNA replication proteins [BR:
rms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RMA_1149 (dnaQ)
DNA repair and recombination proteins [BR:
rms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RMA_1149 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABV85150
UniProt:
A8F2L4
LinkDB
All DBs
Position
1123750..1124439
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AA seq
229 aa
AA seq
DB search
MSSLREIILDTETTGLDPRQGHRIVEIGAIEMVNKVLTGRNFHFYINPERDMPFEAYRIH
GISGEFLKDKPLFHTIADDFLEFISDSKLIIHNAPFDIKFLNHELSLLKRTEIKLLELAN
TIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVYVELMGGRQSAF
KMVDKSAGINNLATNQVNNQTEQATIVIKPTKEELQKHKEFLSRILKTA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttaagagaaataattttagataccgaaactacgggacttgacccacgacaa
ggtcatcgaatcgttgagatcggtgctattgagatggtaaataaggtattaacaggcagg
aattttcatttttatattaatcctgagcgagatatgccgtttgaggcttatagaattcat
ggcatatccggcgaatttttaaaagacaagcctctatttcatacaatagccgatgatttt
ttagagtttatttcagatagcaaactgattattcataatgctcctttcgatattaaattt
ctaaatcacgaattatcattattaaaaagaaccgaaattaaactcttggaactagcaaat
actattgatactttagtaatggctagaagcatgtttccaggctcaaaatataatcttgat
gcattatgtaaaagatttaaagttgataattcaggtaggcagcttcacggagctttgaaa
gatgcagcattacttgcagaagtatatgtagagttaatgggcggtagacaatccgctttt
aaaatggttgataaatctgccggaataaataatttagcaactaatcaagtaaataaccaa
acagagcaagctactattgttattaaacctacaaaagaagagctgcaaaaacataaagag
tttctcagtaggattttaaaaactgcttag
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