Rattus norvegicus (rat): 288489
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Entry
288489 CDS
T01003
Symbol
Rbak
Name
(RefSeq) RB-associated KRAB zinc finger protein
KO
K09228
KRAB domain-containing zinc finger protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
288489 (Rbak)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
288489 (Rbak)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
288489 (Rbak)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
KRAB
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_jaz
zf-AN1
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
288489
NCBI-ProteinID:
NP_001178593
RGD:
1562875
Ensembl:
ENSRNOG00000001099
UniProt:
F1M2Y6
LinkDB
All DBs
Position
12:16488895..16502523
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AA seq
711 aa
AA seq
DB search
MSISKGPLSFKDVAVAFSQEEWQQLDSEERTTYRDVMLETYSNLVSVGYDVTKPNVIIKL
EQGEEPWTVEGDRHAKRHLEIKKVDDPREGIQENGEKHLQCGDDLHSWRAEKGDEFDEAC
TLEPPLISPSSGAHSCVSCGKTLESVTELICSDGSYAVEKPDKCFECGKGYRENPEDLNQ
SEGNSSERDESILQKITILEKPFDYECLEALDRESVFMAHERAYMGEKPYEWNGSGPDFI
QISDFSTYHRSQVEMKPFECTQCGKSFCKKSKFIIHQRAHTGEKPYACGVCGKSFSQKGT
LTVHRRSHLEEKPYKCDECGKTFCQKLHLTQHQRTHSGEKPYECSECGKTFCQKTHLTLH
QRNHSGERPYPCSECGKSFSRKSALNDHQRTHTGEKLYTCNECGKSYYRKSTLITHQRTH
TGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECTECGKTFNLNSAFTRHRKAHAEER
VQECGECGKPSRLQYLPDHADGLGEKHHGCNECGKTFLENSAFSRHQPVPEGEKTYECNI
CGKVFSDLSCYTVHYRGHSEEKPFGCSECGKTFSHNSSLFRHQRVHTGEKPYECYECGKF
FSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQK
SYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHKRGTINVLNVENL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcaaagggcccactgtcattcaaggatgtggctgtggccttctcccaggag
gagtggcagcagctggactctgaggagaggacgacctaccgggatgtgatgctggagacc
tacagcaacctcgtctccgtggggtatgatgtcaccaagccaaacgtgattattaagttg
gaacagggagaagaaccctggacagtggaaggtgaccgccatgctaagaggcatttggaa
atcaaaaaagttgatgaccccagagaaggaatccaggaaaatggcgagaaacatctgcag
tgcggtgatgatctccacagctggagagcggagaagggggacgagtttgatgaagcctgc
accctagaaccacccctcatttcccccagctcaggcgctcacagctgtgtctcctgtggg
aagactttggaatctgttacagaactgatttgcagtgatggaagctatgcagtagagaag
cccgacaagtgttttgagtgtgggaaagggtacagagaaaaccctgaggaccttaaccaa
agtgagggtaactcttctgaacgtgacgaaagtattctgcagaaaatcaccattttggag
aaaccctttgactatgagtgcttggaagccttagacagggaaagtgttttcatggctcat
gagagagcttacatgggggagaagccctatgaatggaacggttctggaccagacttcatc
cagatatcagacttcagtacgtatcacagatcacaagtggaaatgaagcccttcgaatgt
acgcagtgtgggaagtccttctgtaagaagtccaaattcatcatccatcagagagcgcac
acaggagagaaaccgtatgcttgcggtgtgtgtggaaagtcctttagtcaaaaggggacc
ctcactgtacatcggaggtcacacttagaggagaagccctataagtgcgatgagtgtggg
aagaccttctgtcagaagttacacctcacacagcaccagagaactcactcaggagagaag
ccctacgaatgtagcgagtgcgggaagaccttctgccagaagacgcaccttactctacac
cagaggaatcattcaggggagaggccctatccgtgtagtgaatgcgggaaatccttctcc
cggaagtctgccctcaatgaccatcagagaacacacacaggagagaagctctacacgtgt
aacgagtgtggtaagtcctactaccggaagtccaccctcatcacgcaccagagaacacac
acgggggagaagccctatcagtgtagtgagtgtgggaagttcttctctcgcgtgtcgtac
ctcaccatacactataggagccatttagaagagaaaccttatgagtgtacagaatgtggg
aaaaccttcaatctaaactccgccttcaccaggcaccggaaggcccatgcagaagagaga
gtgcaggagtgcggtgagtgtgggaagccgtcccggctgcagtatctccctgatcacgct
gatggcctaggagagaagcaccacgggtgtaatgagtgtgggaagaccttccttgaaaac
tcagccttcagcaggcaccagcccgttcccgaaggggagaaaacttacgagtgtaacata
tgcgggaaggtgttctctgacctgtcgtgctacactgtgcattacagaggtcattcagaa
gagaaaccctttggctgcagcgagtgtgggaaaaccttctctcataattcatccctcttc
agacatcagagagtacacacaggcgagaagccgtacgagtgttacgagtgtggcaagttc
ttctcgcagaagtcctacctcactatccatcacaggatccattcaggagagaagccgtac
gagtgtagcaagtgtggcaaagtgttctctcggatgtcgaacctcaccgtccactaccga
agccattcaggagagaagccctatgaatgtaatgagtgtggaaaagtcttctcccagaag
tcgtacctcactgttcattaccggactcattcaggagagaagccttatgaatgtaacgaa
tgtgggaaaaaattccaccacagatcagccttcaatagccatcagagaattcataaaaga
gggactataaatgtacttaatgtagaaaatctctga
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