Rattus norvegicus (rat): 292988
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Entry
292988 CDS
T01003
Symbol
Mkrn3
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-3
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
292988 (Mkrn3)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
292988 (Mkrn3)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
292988 (Mkrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_2
zf-UDP
Motif
Other DBs
NCBI-GeneID:
292988
NCBI-ProteinID:
NP_001386880
RGD:
1311197
Ensembl:
ENSRNOG00000010172
LinkDB
All DBs
Position
1:complement(125338664..125341178)
Genome browser
AA seq
528 aa
AA seq
DB search
MEESTAPMEAYEAAGAEAGAEGGEGVSAPPPPQFEASGASAVASSAPLQEASGLAPFLMA
PVPANRRAASLRPAPAEGGGARSGPERNTGSWTKQILCRYYLHGQCKEGDNCRYSHDLSG
RRKARGGQDSQPRASADRGPKMATHWEPPTQEVAEAPPTASSSSLPLIGSAAERGFSEAE
IDNAGIGSAAERGFPEAEIDNAGLAAGAAGGAGAEGWEGAIEFVPGQPYRGRMIPPHGPE
APLQSPEIEREHMAMGMGMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAA
QQEAHRRACVEAHERDMELSFAVQRSMDKVCGICMEVVYEKADPSDRRFGILFSCNHTYC
LKCIRRWRSATQFENRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKAC
RYFAGGLGHCPFGEFCFYKHEYPEGWRDQPPRPDGGGSSSAYWHQVLEPVQLREGSVLFK
SRKKEHSVLRLANQLLKKLLCLRGSFSISDDRWLLLQYQLEEYFNLNL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctacagctcccatggaagcctacgaggccgccggcgccgaggcaggtgct
gaggggggggagggtgtgtctgcccccccccctcctcagtttgaggcttctggagcttct
gcggtagccagctcagcccctctgcaagaggcatcgggcctggcaccgtttcttatggct
ccagtccctgcgaaccggcgcgcggcgagtttgagacccgctccagccgaagggggcggg
gccaggtctggtccggagcgcaacacaggcagctggacgaagcaaatcctctgcaggtat
tatctgcatgggcagtgcaaggagggcgataactgtcgctactctcacgacctttctggg
cggcggaaagctagggggggccaagattctcagcctcgggcctctgcagacagaggaccc
aagatggccactcactgggagcccccgactcaggaagtggcggaagccccccctactgca
tcctcaagctccttgcctctgattggctcggctgctgaaaggggcttctcggaagctgag
attgacaatgcaggcattggctcagctgctgaaaggggcttccctgaagctgagattgac
aatgcaggccttgcagcaggtgctgcgggaggagcgggtgcagaaggctgggagggggca
attgagtttgttcctggacagccgtatcgaggtcgcatgatccccccgcatggtcccgag
gctcctctgcagagcccggagattgagagagagcatatggctatgggcatgggaatgccg
ctgccgctttgccgctatgctgctcggggacaatgcctccgtggggacaggtgtgcatac
ccccatggagaaatatgcgacatgtgcgggcaacaggccctgcacccttgggatgcagct
cagcaggaagctcatagaagggcctgcgttgaagcacacgagagagatatggaactctct
tttgctgtgcagcgcagcatggacaaagtgtgtggcatctgcatggaggttgtctatgag
aaggccgaccccagcgaccgccgctttggcatccttttcagctgcaaccacacctactgt
cttaagtgtatccgcaggtggagaagtgccacacagtttgagaacaggatcagtaagtcc
tgcccacagtgcagggtctcctctggctttgtcattcctagtgagttctgggtggaggag
gaagaggagaaggagaaacttgttcagcaatataaggaggggatgagccagaaagcctgc
aggtattttgctggaggcctaggtcactgcccatttggagaattctgtttttacaagcat
gaataccccgagggctggagagatcagcctccgaggccagatggtggtggatcgtccagc
gcatactggcatcaagttttggagcctgtgcagttgcgagagggaagcgtgctgtttaaa
agccgtaaaaaggagcattccgtgcttcgcctggccaatcagttgcttaagaagttgctt
tgcctgcgaggcagtttttccatctctgatgaccggtggctcttgcttcagtaccagctg
gaagaatatttcaatttgaatctgtag
DBGET
integrated database retrieval system
