Rattus norvegicus (rat): 293922
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Entry
293922 CDS
T01003
Symbol
Aff2
Name
(RefSeq) ALF transcription elongation factor 2
KO
K15194
AF4/FMR2 family member 2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
293922 (Aff2)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
293922 (Aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
293922
NCBI-ProteinID:
NP_001414217
RGD:
1565592
Ensembl:
ENSRNOG00000052572
Vega:
OTTRNOG00000001737
LinkDB
All DBs
Position
X:152972579..153477080
Genome browser
AA seq
1281 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKREWERRSQEVQQEEDLFSSGFDLFGEPYKVAEY
TNKGDALANRVQNTLGSYDEMKDLLSNHSSQNHLVGIPKNSVPQTPISKSEASLYPEQKN
RMIPSHQENTHSSVPMPPPSVVILNSTLINSNRKSKSEWPRDNHNTSPGQACQASSQPNK
IQTSTQDPPQTRLEDFFVYPAEQPQIGTAEKSNPSAKEDNNPNSGGEDAFKEIFQSNSPE
ESEFTVQAPGSPLVASSLLAPSSGLSVPTFPPGLYCKTSMGQQKPTAYVRPMDGQDQATD
ISPTLKPSIEFENSFGNLSFGSLLDGKPSAASTKNKLPKFTILQTSEVSLTSEPSCVEEI
LRESQHLTPGFTLQKWSDPSSRASTKMLEDDLKLSSDEDDLEPVKTLTTQCTANELYQAV
EKAKPKNNPVNSLLATPQPTSAAQASVGSGSSSESESSSESDSDTESSTTDSESNEAPRV
ATPEPEPPSTNKWQLDKWLNKVTSQNKSFICGQNETPTETISLPPPIIQPVEVQVKVKPN
PSQSVAVPKERPLLSLIREKARPRPTQKTPETKALKHKLSTSVDSVSQRTIGKKQPKKVE
KNTSFEEFIWPKPNTTSSTPKEKESVELPDPPRSRNKATAHKPVPRKEPRPHVPLATEKK
KYRGPGKIVPKSREFIETDSSTSDSSTDQEETLQIKVLPPCIAPGGNTSKSKETSNASLT
LSTLTSSNSNNNSNNLSTSNEETAFSPPPAMQTELLTPVHDHEIPKNLWVKIDLDLLSRV
PGQNSVPAAPAKTDHHKETASKPKRQTAAITVEKPAPKGKRKHKPAEAAEKIPEKKQRLE
DTTICLLPPCISPAPPHKPPNTRENSSRRANRKREEKLFPPALSPLAEDPPRRRNVSGNN
GFFSQDKNISMAGQITSTKPKRSEGKFCATFKGISISEGDAPKKPASATVTVANTAIATA
TATATAPAIVTATVTATATTTATATTTTTTTTISSITPTITSGLMDSSHLEMTSWAALPL
LASSSTNVRRPKLTFDDSVHNADFYMQEAKKLKHKADALFEKFGKAVNYADAALSFTECG
NAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASPLASDGDKKLAVLCYRCLSLLYLRM
FKLKKDHAMKYSRSLMEYFKQNASKVPQIPSPWVGNGKNTPSPVSLNNVSPINSMGNCNN
GPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKLTRDNKEFFGDLDTLMGPLTQHSSM
TNLVRYVRQGLCWLRIDAHLL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggattgggacttggagcagcagtgtcactatgaacaa
gaccgtagtgcacttaaaaaaagggaatgggaacgaaggagtcaagaagttcaacaagaa
gaagatcttttttcttcaggctttgatctttttggggagccctacaaggtagctgaatat
acaaacaaaggggacgcccttgccaaccgagtccagaacactcttggaagttatgatgaa
atgaaggatctgctctctaaccattccagccagaatcatctggtgggcatcccaaagaat
tcggtgccccaaactcccatcagcaaaagtgaagcaagcttgtatccagaacaaaagaat
cggatgatcccatctcaccaggagaatacccactcctcagtaccaatgcctccaccttca
gtcgtgatactcaattccacgctaataaacagcaacagaaaatcaaaatctgagtggcca
cgagataatcataacactagccctggacaagcatgccaggctagcagtcaaccaaacaag
atacagacatccacacaagacccacctcaaacccgcctggaagacttctttgtctaccca
gctgagcaacctcaaattggtacagctgaaaaatctaacccatctgcaaaggaagataat
aaccctaattcaggtggagaagatgctttcaaagaaatctttcagtctaattcaccagaa
gaatcagaatttacagtccaagctcctgggtctcccctagttgcctcatctttattagct
cccagcagtggcctttcagtcccaaccttcccaccagggctttactgcaaaacaagcatg
ggacaacaaaaaccaactgcatatgtaaggcccatggatgggcaggaccaggcaactgac
atctctccgacactgaagccttccattgaatttgagaacagttttggaaacctctctttt
ggatcactgttggatgggaaacccagtgcagccagtacaaagaacaaactgccaaagttc
acaatcctgcaaacaagtgaagtaagccttaccagcgagccaagctgtgttgaggaaatc
ttgcgggaatctcagcatctgactccaggattcaccttacaaaagtggagtgacccaagc
agcagagcttcaacaaagatgcttgaggacgacctgaagttgagcagtgatgaagatgac
cttgaacctgtgaagaccttgaccacacagtgcacagccaatgagctctaccaggctgtt
gaaaaggcaaaacctaagaataatcctgtgaactcactcttggccacaccacagcctaca
tctgcagctcaagctagtgtggggtctggcagctccagtgagtcagagagtagctcagaa
tcagactcagacactgaaagcagcaccaccgacagcgaatccaacgaggctcctagagtg
gctactccagagcctgagccaccctcaaccaacaaatggcagctagacaaatggctgaac
aaagtcacgtcccagaacaagtcatttatttgtggccaaaatgagacacccacagagacc
atttctctgcctcctccaataatacaaccagtggaggtccaggtcaaagtaaaaccaaac
cctagccaatctgtggctgtacccaaagaaaggcccctcctcagtcttattagggagaaa
gctcgaccaaggcctacacagaaaactccagaaacaaaggccttgaagcataagttgtca
acatcagttgactcagtttctcaaaggacaattggaaagaaacaacccaaaaaagttgag
aaaaacaccagctttgaggagtttatctggcccaaaccaaatactaccagcagtactccc
aaagaaaaagaaagtgtggagcttcctgacccaccacgaagccgcaacaaagctactgcc
cacaaaccagtgcctaggaaagagccaaggccacatgtccccctggccactgagaagaag
aagtatagagggcctgggaagattgttcccaagtcccgggaatttattgaaacagattca
tctacatctgactcaagcacagatcaggaagagaccctgcagatcaaagtactgccacct
tgcattgcacctggaggtaatacttctaaatccaaggagacttctaatgccagcctaaca
ttaagcaccttgaccagcagcaacagcaacaacaacagcaacaacttgtccaccagcaat
gaggagacagctttttcaccacctcctgccatgcaaactgagcttttgacccctgtacac
gatcatgagattccaaaaaacctctgggtgaagattgaccttgacttactttctagagta
cctggccaaaattcagtcccagcagcacctgcaaagacagaccaccacaaggagactgcc
tctaaacccaagcgacaaactgctgccataactgtggaaaaaccagcccctaagggcaaa
cgtaagcacaagccagcagaagctgcagagaaaatccctgagaagaagcaacgcctggag
gacactactatctgcctgcttcccccttgcatctcaccagccccaccccacaagcctccc
aacactagagaaaattcatccaggagagcaaacaggaaaagagaagaaaagctgttccct
cccgcactttccccactggcagaggaccctccacgtcgcagaaatgtcagtggcaacaat
gggttcttcagtcaagacaaaaatatctccatggctggacaaatcacctctaccaaacct
aaaagaagtgaaggcaaattctgtgctactttcaaagggatatccataagtgagggagat
gctccaaaaaagcctgcctctgccaccgttactgtcgccaatacagctattgccactgct
actgccactgccactgctcctgccattgtcactgccactgtcacagctactgccaccacc
actgccacagccaccaccacaacaaccaccactactatttctagcatcacccctacaatc
acttctggccttatggatagcagtcacctggagatgacatcctgggcagccctgcccctc
ctggccagcagtagcaccaatgtccggagacccaagctcacttttgatgactctgttcac
aatgctgatttttacatgcaagaggctaagaagctgaaacacaaagctgatgcactgttt
gagaaatttggcaaagctgtgaactatgcagacgcagccttgtccttcactgagtgtggc
aatgccatggaacgtgatcctctggaagcgaagtccccatataccatgtattctgagact
gtggagctcctcaggtacgcaatgagactgaagaactttgcaagccccttagcttctgat
ggggacaaaaagctagcagtattatgctaccgatgcttgtcacttctctacttgaggatg
tttaagctgaagaaggaccatgctatgaagtattccagatcactgatggaatattttaag
caaaatgcttcaaaagttcctcagatcccgtctccttgggtaggcaacggaaagaatacc
ccatccccagtgtctctcaacaatgtctctcccatcaactcaatggggaattgtaacaat
ggcccagtcaccattccccagcgcatccaccacatggctgctagccatgtgaatattacc
agtaatgtgcttcggggctatgaacactgggatatggctgataagctgacaagagacaat
aaagagttctttggtgatctggatacactgatggggcctctgacccagcacagcagcatg
accaatcttgtccgctatgttcgccagggactgtgttggctgcgcattgatgctcatttg
ttatag
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