Rattus norvegicus (rat): 305230
Help
Entry
305230 CDS
T01003
Symbol
Shroom3
Name
(RefSeq) protein Shroom3
KO
K18625
protein Shroom
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
305230 (Shroom3)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
305230 (Shroom3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
305230
NCBI-ProteinID:
NP_001094359
RGD:
1310470
Ensembl:
ENSRNOG00000002208
LinkDB
All DBs
Position
14:complement(15383769..15681158)
Genome browser
AA seq
1986 aa
AA seq
DB search
MRTPENLEEPSATPNSSRTPKERYVYLEALLEGGAPWGFTLKGGLEHGEPLIISKIEEGG
KADSVSSGLQTGDEVIHINEVVLSSSRREAVSLVKGSYKTLRLVVRRDVCAAPGHADPGT
SNSISSELLTCSPQHRKATWSGGVKLRLKQRCSEPAARPHSWHTTKFGETQADVSMMRIS
QGTVGPPWHQSCHSSSSTSDLSNYDHAYLRRSPDRCSSQGSMESLGPRGGSPPCHLLSPA
KSTSSIDQLGHLHNKRDSAYSSFSTSSSIFEYPPPGGSARERSGSLDMIPARGGLLEGMR
QADIRYVKTVYDTRRGVSSEYEVNPSALLLQGRDAHTSADSQGCAKWHSIPRGKGTPPLP
WSQQCSGSPETADNPPHKAGAPMPPTRSDSYVALRHRERPSSWSSLDQKRFCRPQTNSLG
SQKTPFVEEQLHTVPERSPENSPPVKPKHNYTQKTQPGQPLLPTGIYPVPSPEPHFAQVP
QPSVSGNGTVYPALVKESGYTAAQGTCSKMAALDENGNQKEVSRPGFAFCQPPEHDSMTP
VEKKPEPRAKYIPYKVHFSSVPENEDSSLKRHVTPPHGNSLYPSERKNVHGGGSRPCSNH
HSLPSAQAQAPHAGDDDRRPSRLFQPWEGDFQEDHNANLRQKVEREGQGQGLPGNSGGTK
STFSPLQNIPENLRRQSSVDLGEGLEVYPGGRSTCATTTTKVEDPGRKAGPDNRGYLDRS
VSYPRPEGKMNAAESFHSADSRYEEPLAAPPQQTSGMSQRRLSASSTPALQYKKPHCSVL
EKVSKIEEREQGRHRPTSVGSSAYALSYRPGRTGPTPSTSSSDLDDPKASSSHFSESAAE
HLRNGEQNPPNGEPKLEEASRQQCNQLLRRTTADGRGPPARGSEPSRPEARLLRSQSTFQ
LFSEAEREASWSEDRPSTPESPLLDAPFSRAYRNSIKDAQSRVLGATSFRRRDLEPGTPA
TSRPWRPRPASAHVGMRSPEASAPLSSPHTPRERHSVTPATGTPPAPQAARRGARRRLTA
EQKKRSYSEPEKMNEVGVSEEAESVHCVPQRPAQLRFSESTVADRRRLFERDGKACSTLS
LSGPELKQFQQSALADYIQRKTGKRPTGAACTPEPGLRERAQSVYFQAVPAAPEGPGLAS
ACSLSSLREPEVLPCKEHPHQSAADGPQTPRDRSSSFASGRLVGERRRWDPQAPRQLLSG
ANCGPRGVQRMDRTSRGPPSWDMVVGKSGKSKSAEDLLERSDTLTVPVHVRSRSSPTSDK
KGQDVLLREDSGFGFVKDPYLAGPGSRPLSYSDRGQKEQALPLHHPATCWNGSGYKATVV
SSTESSGAPDHLKQLRAPCPRPLSAGMHGHFPDARASSVAPLSSPLPSPVPSGYRSQLDM
DQQMGHQPLPSPASAVTQPPSPRSHELEEGMWKRASLPQRPPRPWKWAHAVREDGLAEDA
SSAPEFATLKHYKNQLSLPSSCSTSDPDTPGRISLRISESALQASPPPRGDYDDEVFVKD
LHPKVPSSPTFEALPPPPPPPSPLSQEPLTCGSDDFPSPPPQAMCEAPLDGEVSEEPGSG
SCGLPRVTATREGQVPGAGHAEGSQIMVAIPPQTSAEGSAAESSTAARVSAQPPLHSFPG
KQPCPSQARNLTYEPADRTQDLGKKIHAEPQKTSEDIRTEALAKEIVHQDKSLADILDPD
SRMKTTMDLMEGLFPRDAGVLKENAERRAVDSTTRRAGWEVETSDHKEAAGVLVNCPAYY
SVSAAKAELLNKIKDMPEELREEEEQEDVNEKKAELIGSLTHKLETLQEAKGSLLTDIRL
NNALGEEVEALISELCKPNEFDKYKMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDAS
KEERSSLNEKRKVLAGQHEDARELKENLDRRERVVLDILANYLSAEQLQDYQHFVKMKST
LLIEQRKLDDKIKLGQEQVRCLLESLPSDFRPKAGAISLPPALASHVTPGGGPAFGGVFP
TLTSPL
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccccgagaacttggaggagcctagcgccactccaaactccagcaggaccccc
aaggagagatacgtttatctggaagcgctcctagagggaggggctccctggggcttcacc
ctgaaaggtggcctggagcatggagaaccattaattatttccaagatcgaagaaggcggg
aaggctgactccgtgagctccggactgcaaactggagatgaagtcatacacatcaatgag
gtggtgctgagcagctccaggagagaggctgtctccctggtgaaaggatcctacaagacc
ctccggctggtggtacgcagagacgtgtgtgcagccccgggccatgcagatcctggtacc
tcgaattccatcagctcagagctgctcacctgcagtccccagcaccggaaagcaacatgg
tcaggaggggtgaaacttcggctaaagcagaggtgcagtgaacctgccgctcgcccacac
tcgtggcataccaccaaatttggagagacccaggctgacgtcagcatgatgcggatatct
cagggcacagtgggccctccttggcaccagagctgccattccagctcttctacgagtgac
ctctccaactacgaccatgcttatctgaggcggagccctgaccggtgcagctcccagggg
agcatggaaagcctgggtccccgtggcgggtccccaccttgccatcttctttcccctgcc
aagtccacgagcagcatcgaccagctaggccaccttcataacaaaagagactcggcctac
agctccttctccaccagttccagcatcttcgagtacccgcccccgggtggctctgcccga
gaacgttcaggctccctggacatgattcctgcccggggcggcctcctagaagggatgagg
caggcagacattcgctatgtcaagacagtttacgatacccggaggggagtatcttcagag
tatgaggtgaacccttcagccttgcttcttcaaggtagggatgcccacacctcagcagac
agtcagggctgtgctaaatggcacagcattcctcggggcaagggaacacctcccctgcct
tggagccagcagtgttctggttccccggagactgcggacaacccaccccataaggctggc
gcacccatgcccccaactcgcagtgacagttatgtggccctccggcatcgtgagcgtccc
agctcctggtccagccttgatcagaaaaggttctgccgtcctcagacgaactctttgggc
tcccagaaaaccccattcgtcgaggaacagctacataccgtcccagagaggagcccggag
aacagccccccagtgaaacctaagcataattatacccagaagacgcagcctggccaacct
ctactgcccacgggcatctatccggtaccttctccagagcctcactttgcccaggtgccc
cagccctctgtgagtggtaatggtacagtctaccctgcactggtcaaagagagtggatac
acagctgctcagggaacttgtagcaagatggctgccttagacgagaacgggaatcaaaaa
gaagtgagcaggcctgggtttgccttctgtcagcccccagaacacgactcgatgactcca
gtggagaaaaagccagaacccagggccaaatacatcccctacaaagtccatttttcttca
gtgcctgaaaatgaagactcctccctcaagagacacgtcacacctccccacggcaatagc
ctataccccagcgagagaaagaacgttcacggtggtggcagcagaccgtgttctaatcac
cacagtctcccgtccgctcaagcccaggccccgcacgcgggtgatgatgacaggaggcct
tccaggctcttccagccctgggagggtgactttcaggaagatcacaatgccaacctcagg
cagaaagtggagagggaaggccaaggccagggcctgccaggcaactctggtgggaccaaa
tcgaccttctcacctctccagaatattccagaaaatctaagaagacaaagcagcgtggac
ctaggagaaggcctggaggtttaccccggtggcagatccacctgtgccaccaccaccacc
aaggtggaggaccctgggaggaaagcagggcccgacaacaggggctacctggacaggtct
gtttcctatccaaggcccgaggggaaaatgaacgctgcagaatccttccacagtgcagac
tccaggtatgaagagcccctggccgcgccaccgcagcagacatccggtatgagccagagg
aggctcagtgccagcagtacccctgccctgcagtacaagaagccccactgctccgtgctg
gagaaggtttctaagatagaggagcgagagcaagggcgccacagacccacgagtgtgggc
agctccgcttacgccctcagctacaggcctggtaggactggccccactcctagtacttcc
agcagtgaccttgatgatccaaaagccagcagctcccatttctctgagtccgccgccgaa
cacctgcgaaatggggagcagaaccccccaaacggggagcccaaactggaagaggcttcc
aggcagcagtgcaaccagctgctgaggaggaccactgcagatggccgtggacctcctgcc
cgaggcagcgagccctcaaggcccgaggcccgcctgctccgcagccagagcacctttcag
ctcttcagtgaggcggagagagaagcctcgtggtcggaggataggcccagcacccccgag
tcacccctcctagacgcacccttcagccgcgcctacaggaacagcatcaaggatgcccag
tcccgtgtcctgggggccacatcatttcgtcgccgggacctggaaccgggcacccccgcg
acttcgaggccttggcgcccgcgacccgcctctgcccacgtgggcatgcggagccccgag
gcctcggcacccttgtcctccccgcacacccctcgggagagacacagcgtgaccccggcc
acagggaccccgcctgcaccccaggctgcccgcagaggggcacgccggcgcctcacagcc
gagcagaagaagcgttcctactcggagccggagaagatgaacgaggtcggggtctcggag
gaggctgagtccgtgcactgcgtcccacagaggccagcgcagctgcgcttctcggagagc
accgtggccgaccggcgacgcctcttcgagcgcgacggcaaggcctgctccacgctcagc
ctgtctggccctgaactgaagcagttccagcagagcgccctggccgactacatccagcgc
aagaccggcaagcggcccactggagctgcctgcacgccggaacccgggctgcgcgagcgc
gcacagagcgtctactttcaggcggtccccgcggcgcccgaaggccccggcctggcctcc
gcctgcagcctgagttcgctacgggagcccgaggtgctgccctgcaaggagcacccccat
cagtccgccgcagatggtccacagacgccccgagatcgcagcagctcctttgccagcgga
cgcctagtcggggagcgacgacgctgggaccctcaggcccccaggcagctgctcagtgga
gctaactgcggacccaggggcgtccagaggatggacaggacctccagagggccgccttcc
tgggacatggtggtcgggaagtcagggaagtccaagtcagccgaggatctgctggagcgc
tcggacacactgaccgttcctgtgcatgtgaggtccaggtcgtctcccacctcggacaag
aaaggtcaggatgtgctcctcagagaagacagtggctttggttttgtgaaggatccatat
ttggctggccctggatctaggcctctcagctactcggacagaggccaaaaggagcaggca
ttgcccctgcaccatcctgccacttgctggaatggctcaggctacaaagccactgtggtt
tcctctactgaatcttccggagccccagatcatctgaagcaacttagagcaccttgccct
aggccactttcagcaggaatgcacggccacttcccagatgccagagcctcctccgtggcc
cccctcagctcccctctgccatcacctgtcccctccggttaccgctcacagcttgacatg
gatcagcagatgggacatcagcctctcccctcccctgcctctgcagtgacgcagcctccc
agcccaagaagccatgagctagaggagggaatgtggaagagggcgtccctgcctcagcga
ccccctcgaccttggaagtgggcccacgcagtccgagaggacggccttgctgaggacgcc
tcatcggcgcctgagtttgcaaccctgaagcactataaaaaccagctgagtcttccgagt
tcgtgcagcacttctgacccagacactccagggaggatctctctccgaatatccgagtca
gccctacaagcttccccgccaccccggggggactatgatgatgaggtgttcgtgaaggac
ttgcaccccaaggttccttcaagccccacatttgaagctctccccccgcccccaccacca
ccttctccactgagccaggagcctctaacgtgtggctcagatgactttccttcacctcct
ccccaagccatgtgtgaggcaccgctggatggcgaagtatcggaggagcccggcagcggt
tcctgcggacttcccagggtgacagccacgagggaaggacaggtgcccggggcaggccat
gcagaaggaagtcagataatggttgccatcccaccccaaacttcggccgaaggctcagca
gccgagtccagcactgctgcccgagtgagcgcccagcctccgctccacagttttcctggc
aagcagccctgtcccagccaggcccgaaacctcacttacgaacctgctgacagaactcag
gatctagggaagaaaatccatgctgagccccagaagacttcagaagatatccgaacggag
gctctcgccaaggaaattgtccaccaagacaagtctctggcggacattttggacccggac
tccagaatgaagaccacgatggatctgatggagggtctgttccccagggatgctggtgtg
ctgaaggagaacgctgagaggagagccgtagacagcaccaccaggcgtgctgggtgggaa
gtcgagacgagcgaccacaaggaggcagcgggtgtgctggtcaactgccctgcgtactac
agtgtctctgctgccaaggcggaactgctgaacaaaatcaaagacatgccggaggagctg
cgggaggaggaggagcaggaggacgtcaatgagaaaaaggctgagctcattggaagcctc
acccacaagctggagaccctgcaggaagcgaaggggagtctgctcacggacatcagactg
aacaatgccctgggggaggaggtggaggccctgatcagtgagctctgcaaacccaacgag
ttcgacaagtacaagatgttcataggcgacttggacaaggtggtcaacctgctgctctcc
ctgtctggacgcctcgcccgagtagagaacgtcctcagtggccttggtgaagacgccagt
aaagaagaaaggagttctctgaatgagaaaaggaaggttctggctggccagcatgaggat
gcccgggagctcaaggagaacctggaccggagggagcgcgtggtgctggatatcctggcc
aattacctgtccgccgagcagctccaggactaccagcacttcgtgaaaatgaagtccaca
ctcctcatcgagcagcggaagctggatgacaaaataaagctgggccaggagcaggtcagg
tgtctgctggagtcgctgccctcagacttcaggcccaaggcaggggccatctccctgccc
ccagccctcgccagtcatgtgactcctggggggggccctgcattcggtggcgttttccca
acgttgacctctcctctttaa
DBGET
integrated database retrieval system