Rattus norvegicus (rat): 306941
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Entry
306941 CDS
T01003
Symbol
Carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
306941 (Carmil1)
Membrane trafficking [BR:
rno04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
306941 (Carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Motif
Other DBs
NCBI-GeneID:
306941
NCBI-ProteinID:
NP_001178621
RGD:
1306623
Ensembl:
ENSRNOG00000016576
UniProt:
A0A0G2JXG7
LinkDB
All DBs
Position
17:41235819..41516204
Genome browser
AA seq
1374 aa
AA seq
DB search
MTDESSDVPRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARI
PTKLELTFSYLEIHGVICHKPTQMVVETEKCNVSMKMASLEDASDVLAHIGTCLRRIFPG
LSPLRIMKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNLLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNVLRGDDLSHMYNF
LAQPNTIVHLDLSNTECSLEMVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPPSFKQFF
SSSLALIQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELGHCLRSGGAQVLEG
CIAEIHNITSLDISDNGLESDLSTLIVWLSRNRSIQHLALGKNFNNMKSKNLTPVLDNLV
QMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNSMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTSPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRACGGDAIQED
LKAAERLMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQEILESMAGEVTRVVDEQLK
GLLESMVDAAENLCPNVMRKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDRIVDEILDSLSNSHRKLANHFSRLSKSLPQREDLEVELVEEKPVKRAIL
TVEDLTEVEKLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDP
PFPSVRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAVCSINIIPHDGEQN
GLMGRVDEGVDEFFTKKVTKMDCKRSSTRCSDTHDLVEGDEKKKRDSRRSGFLNLIKSRS
RSERPPTVLMTEELSSPKGAVRSPPVDTARKEIKAAEHNGAPERTEEMRTPEPLEEGLAE
EAGRAERSDSRGSPQGGRRYVQVMGSGLLAEMKAKQERRAACAQKKLGNDVISQDPSSPV
MSNTERLDGGATVPKLQPGLPEARFGLGTPEKNAKAEPRVDGGCRSRNSSSMPTSPKPLL
QSPKPSPAARPSIPQKPRTASKPEDTPDSPSGPSSPKVALLPPILKKVSLDKERDDQSSS
QSSPRTFSQEVSRRSWGPAQEYQEQKQRNLGKDGHQGSKSSDSGEEAEKEFIFV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagagctccgatgtcccccgggagttaatggaaagcatcaaggatgttatt
ggcagaaagatcaaaatctcggtgaagaagaaagtgaagttggaagtgaagggtgacaga
gtggagaacaaagtgctggtgctcacatcatgccgagctttcctcctgtcagcacgcatc
cccaccaagctcgagttaaccttcagctatctagagattcatggagtcatctgccacaaa
cctactcagatggttgtggaaactgagaagtgtaacgtgtccatgaagatggcgtcactg
gaggatgcgagtgatgtgctggctcacataggcacctgcttacggaggatatttccgggc
ctttccccactgagaatcatgaagaaagtctccatggagccatctgagcgcctggccagt
ctccaggccctgtgggacagccagaccttggctgagccaggcccctgtggtgggttttct
cagatgtatgcctgtgtatgcgactggctgggattttcgtacagggaagaagtgcagtgg
gatgtggatacaatttatctgacacaagataccagggaattaaatttacaagacttcagt
catctcgagcacagagacctgattcccatcatcgctgccctggaatataaccaatggttc
accaaactgtcctccaaggatctcaagctgtccacggatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatctactggaagagttggtgttggaaaatgctggactcagaaca
gattttgcacagaaattggccagtgctctagcacacaatcctaactcaggacttcacaca
atcaaccttgctgggaacccgctggaggatcgaggcgtgtcctccttaagtattcaattt
gccaaactcccaaagggattgaagcatttgaacctgtctaaaacctcattgtcacctaaa
ggggtgaatagcctttgtcagtccctcagtgccaaccctctgactgcctctaccctcacc
cacctggacctctcagggaatgtcctccgaggagatgacctctcacacatgtacaatttt
ttggcccagcccaacaccattgttcatctggatctgtctaatactgaatgttctctggag
atggtgtgtagtgctctcctccggggatgccttcagtgtctggccgtgctcaatctctcc
aggtctgtcttctctcacaggaaaggaaaggaagtccctccgtctttcaagcagtttttc
agcagttctctggctttgatccaaatcaatctttcaggcacaaaactgtctcccgagccc
ttgaaggcattgctcctgggcctggcctgcaatcatagtttgaagggagtctctctggat
ctcagcaattgtgagcttggccactgtctgaggtccggaggagctcaagtgttagaaggc
tgtatcgctgaaatccacaacatcaccagcttagatatctctgacaacggtttagaatct
gacctatctaccctgattgtgtggctcagtagaaacagatcaatacagcacctggcgtta
ggcaaaaattttaacaatatgaaatccaaaaatctgacgcctgtgttggacaacttagtg
cagatgatccaagatgaagactctcctctgcagtccttgtccctggctgactcaaaactc
aagactgaagtcaccatcatcatcaatgccttgggcagcaacacctccctgaccaaagtg
gacatcagtgggaatagcatgggggacatgggagcgaagatgctggctaaggctctacag
atcaacaccaaactcaggacagtcatctgggacaaaaacaacattactgcacaaggcttc
caagacatagccgttgctatggaaaagaactacacactgagatttatgccaattccaatg
tatgatgcttctcaagctcttaaaacaagccctgagaagacagaagaggctctgcagaag
atagaaaattatctgctccggaatcacgagaccaggaaataccttcaggagcaggcctac
cgcctccagcaaggcattgtcaccagcaccacccagcagatgattgaccggatatgtgtg
aaggttcaggatcacctcaactccttacgagcctgtgggggggatgctattcaggaggat
ttaaaggcagcagagcggctcatgcgagatgctaagaattctaaaacgttgttaccaaat
ttataccatgtgggcggagcatcatgggcaggagccagtgggctgtcatccagtcccatt
caggagatcctggagtcaatggccggagaagtcacaagagttgtggatgaacaactgaag
ggtttgctagaatctatggtggatgcggccgagaacctctgccccaatgtcatgagaaaa
gcccacatccgacaagacctgatccacgccagcaccgaaaagatttccattccacgaacc
tttgttaaaaatgtcctgttggaacagtctggaattgacattcttaacaaaattagtgag
gtgaagctgacagtggcctcgttcttgtctgaccgaatcgtagatgagatcctggattct
ctctccaacagccatcggaagctggccaaccatttcagcaggctaagcaagagccttccc
cagcgagaggacctagaggtggagctggtggaggaaaagccggtgaaacgggccatactt
acggttgaggatctcactgaggtggagaagctggaagacctagacacttgtatgatgact
cctaagtccaagaggaagagcatccacagccgaatgctgcggcctgtctccagggccttt
gaaatggagtttgatcttgataaagccctggaagaggtgccgattcacatcgaagacccg
cctttcccatcagtccggcaggagaagcgaagctcgggcttgatctctgagctgccctca
gaggaaggcaggagactggaacacttcaccaagttaaggcccaagaggaacaagaagcag
caacctacacaagcagcggtctgtagcatcaacatcatcccccatgatggagaacagaat
ggcctcatgggcagagtggatgaaggtgtagatgaatttttcaccaagaaggtgactaaa
atggattgcaagaggtcatccacgcgctgttcagatacccacgacctcgtagaaggagat
gagaagaaaaaacgggattctcggagaagtggctttctcaacctaattaaatccaggtcc
agatctgagcggccgcccacggtcctgatgacagaagagctctcctccccgaaaggggca
gtccggagcccaccagtggataccgccaggaaggagataaaggcagctgagcacaatggt
gctccagaacgcacagaggagatgaggacaccggagcccctggaggagggtctagcagag
gaagctggcagggctgagcgcagtgacagcaggggcagcccacagggtggccggcgctat
gtgcaggtgatgggcagcgggctgctggcggagatgaaggctaaacaggagcggagagca
gcatgtgcgcagaagaagcttggcaacgatgtcatctcccaggatccctccagcccagtc
atgagcaacacagagcgattagatggaggggcaacagtgcctaaactgcaaccaggtctt
ccagaggcccgctttggtttgggaacaccagaaaagaatgccaaagctgaacccagggtg
gatggaggctgcaggtcccgaaactcctccagcatgcccaccagcccgaagcccctcctt
cagtcccctaagcccagccctgcagcccggccgtctatccctcagaagccaagaactgcc
tccaaacctgaagataccccagactctccatctggtcctagttcccctaaagttgccctt
cttccacccatcctcaaaaaagtctccttggacaaagagcgtgatgaccagagcagctca
cagtccagtcctaggaccttctcccaggaagtctcaaggagaagctggggcccagcccag
gagtatcaagaacaaaagcaacggaacttgggcaaagatggtcaccaggggagcaaatcc
agtgactctggagaagaggcagaaaaagagtttatttttgtgtaa
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