Rattus norvegicus (rat): 308473
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Entry
308473 CDS
T01003
Symbol
Samd4b
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
308473 (Samd4b)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
308473 (Samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
VBS
Motif
Other DBs
NCBI-GeneID:
308473
NCBI-ProteinID:
NP_001100968
RGD:
1305597
Ensembl:
ENSRNOG00000068139
UniProt:
D4A769
A6J9J0
LinkDB
All DBs
Position
1:complement(92816955..92855243)
Genome browser
AA seq
687 aa
AA seq
DB search
MMFRDQVGILASWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPSYHSRQGSDEWGGPAE
LAPGEAGSGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATPTAKDGGRGEPLLPGAEPPL
THPGSDKGTEAKDPPAAENYPPPPAPAPSDSSEPAPAPVADGDIPSQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALDMQSYRQ
QKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTS
PSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLE
INPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaagtgggcatcctcgctagctggttcaagggctggaatgagtgt
gagcagacagtggccctgctgtcacttctgaagcgggtcacccgtacccaagcccgcttt
ctgcagctctgcctggagcactcactggcggactgcaatgatatccacctgctggagtca
gaggccaacagtgctgccatcgtcagccagtggcaacaggagtccaaagagaaggtggtg
tccctcctgctgtcccatctgcccctgctccagccaggcaacacagaggccaagtctgag
tacatgagactgctgcagaaagtgctggcctactccatcgagagcaatgccttcattgaa
gagagccgccagctcctctcgtatgccctcatccacccagccaccacgctggaggaccgc
aatgcactagccctctggctgagccacctagaagagcggctagctagtggtttccgcact
cggccagagccctcctaccattcacgccagggctcagatgaatggggcggacctgcagag
ctggcccctggagaggcagggtcaggctggcaggacaagccaccccgggaaaacggacac
gtacccttccacccatccagctctgtgccgccggccatcaacagtattgggagcaatgca
aacacaggtctcccctgccaaatccaccctagcccactgaagcgctccatgtcactcatc
cccacgagccctcaggcccctggtgagtggccgagtccagaggagcttggggcccgggct
gctttcaccacgcccgaccacgcacccctctcaccgcagagcagtgtggcttcctctggc
agtgagcagacggaggagcagggctccagccggaacacgttccaggaggatggcagcggg
atgaaagatgtaccctcgtggctcaagagcctccgcttgcacaagtatgctgctctgttt
tcacagatgagctatgaagagatgatgaccctaactgagcagcacctagagtcgcagaat
gtcaccaaaggtgcccggcacaagatagccctgagcatccagaagctgcgtgagagacag
agcgtcctcaagtccctagagaaggatgtgctggaaggtggcaatctgcggaatgctctg
caggaactgcagcagatcatcatcactcctatcaaggcctacagtgtccttcaggctacc
cctactgccaaggatgggggtcggggggagccgctgctgccaggtgctgagcctcccctc
acccaccctggatcagacaagggcactgaggccaaggaccctccagctgcagagaactat
cctcctccaccagctccagccccctctgatagcagtgagccagccccagctcccgtcgcc
gacggagacatccccagccagtttacacgggtgatgggcaaagtatgcacccagctgctg
gtgtcccgaccagacgaggagaacatcaccagttacctccagctcatcgaaaagtgcctg
actcatgaggctttcacagagacacagaagaagcggctgctgtcctggaagcagcaagtg
ctgaaactcctccggacattcccacgcaaagctgctctggacatgcagagctaccggcag
cagaagggctgggcatttggctccaactcgctccccatagctggctctgtggggatgggt
gtggcccggcggacccagcggcagttcccaatgcctcctcgggcattaccacctggcagg
atgggcctcctgagcccttctggcattgggggtgtctctcctcgacatgccctaaccagc
cccagtcttgggggtcagggccgacagaacctgtggtttgccaatcctggaggcagcaac
agcatgcccagccagagccgcagctctgtgcagcgcacccactcgctcccagttcactcg
tcaccccaggctattctcatgttccctccagactgcccggtacctgggcctgacctggag
atcaatcctaccctggagtctctgtgtctgagcatgacagaacacgccttgggtgatggg
acagacaaaacctccaccatctga
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