Rattus norvegicus (rat): 308912 Help Entry 308912            CDS       T01003                                  Symbol Dchs1 Name (RefSeq) protocadherin-16 precursor   KO K16507   protocadherin-16/23 Organism rno  Rattus norvegicus (rat) Pathway rno04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:rno00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     308912 (Dchs1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:rno04515]     308912 (Dchs1) Cell adhesion molecules [BR:rno04515]  Cadherins   Cadherin related    308912 (Dchs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_4 Motif Other DBs NCBI-GeneID:  308912 NCBI-ProteinID:  NP_001101014 RGD:  1309878 Ensembl:  ENSRNOG00000031643 UniProt:  D4ACX8 LinkDB All DBs Position 1:complement(169516758..169550789) Genome browser AA seq 3291 aa AA seqDB search MQEELSVALSCPGMKSLGTLLPLLVLLGTTVPGIRGQAGSLDLQIDEEQPAGTLIGDISA GLPPGTAPPPMYFISAQEGSGVGTDLDIDEHSGVVCTARVLDRERRDRYRFTAVTPDGAT VEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPAHDADAGRLGTQGYALSGDG AGETFRLETRPGPGGAPVPELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL DINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFS IDAHTGFLKLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIF LSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCV ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVA LPGSFVVRVTARDPDQGTNGQVTYSLAPGTHTHWFSIDPTSGIITTAATLDYELEPQPQL IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD SGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQGPSSFDFTVTAIDGGGLK SMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILA GNSPPLFALDAHSGLLTVAWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPT PPIFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVTLTLSGGDPRGLFSLDSASGLL KTLRPLDRELLGPVLELEVRAGSGTPPVFSAARIRVLLDDVNDNSPAFPAPEDTVLLPQN TAPGTPVYTLRALDPDSGANSRVTFSLLAGGDGLFTVDPTTGHVRLMGPLGPPGGPPHEL EVEAQDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA PDGSPVTYHLAADGASNPFGLESQSGWLWVRAALDRESQELYTLKVMAVSGSKAELGQQT GTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTYSLQQ LSEDSKAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLND NSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGSGSELFSL HPHTGELHTAASLIRAERPHYVLTLSAHDQGSPPRSASLQLLVQVLPSTRMVESPDLVEA DSAATVPVVLTVTAAEGLRPGSLLGSVAPQEPASMGVLTYTLVGGADPEGTFALDSASGR LYLARVLDFESGPAWRALTVRAEGPGGAGARLMRVQVRVQDENEHAPAFARDPLALALPE NPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDRETTP ALLLIVEATDRPANASRRKATRVSARVFVTDENDNAPVFASPSRMRLPEDQPPGPAALHV VARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVVASDHGSP PRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG GVSGESFSLDPNSGVLTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDH SPTFGNTHLSLEVPEGQDPQTLTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEF GTTRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPED APVGTLLLQLQAHDPDEGDNGRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAF SVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPAALGPRDRVLFIVATDLGRPA RSATGVVIVGIQGEPERGPRFPRANNEAVLRENAPPGTPVISPKAVHSGGSNGPITYSIL SGNERGIFSIQPSTGTITVQSAEGLDFETNPRLRLVLQAESGGAFAFSVLTLTLQDANDN APRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQPARGLFHVDPATG TITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWELRVSE DALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSIGRYGGRVSLTGPLDFEQCDHYHL QLLAHDGPHEGHANLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSVSATDRDSGA NGHISYHLASPAEGFSVDTNNGTLFTTVGAMALGHEGPGVVDVVLEARDHGAPGRSAQAT VHVQLKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEAIDADGSRSHATVDYSIISGNR GRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVTAADRGQPPRSSAVP VTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLSSGDPL GLFELDENSGALRLAHPLDCETQAQHQLVVQAADPAGTHFALVPVTVEVQDVNDHGPAFP LSLLSTSLAENQPPGTLVTTLHAMDGDAGTFGRLRYTLLEAVPGPEGREAFSLNSSTGEL RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSRAPGSGTATSGGG GRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAASLGV VVVLALAALVLGLVRARSRKAEAAPGPMSQTAPIASSSLQKLGREPPSPPPSEHLYHQTL PSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAARGPDS GIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPATATAFLGGCGLSP APTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEIARLK DEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISHEGSLSS AAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSTESGLEPPDDTELRI NT seq 9876 nt NT seq  +upstreamnt  +downstreamnt atgcaggaggagctaagtgttgcactctcctgccctggcatgaagagcctcgggactctg ttaccactgctggtgctgttgggaactacagtgccaggaatccggggtcaggctgggagc ctggacctacagatagatgaggaacaaccagcaggcacactgattggcgacatcagtgca gggctcccaccaggcacagctcctcctcccatgtactttatctctgcccaggagggcagt ggcgtaggcacagacctcgatattgatgagcacagtggggtggtctgtacagctcgagtc ctggaccgtgagcggagagaccgttaccgcttcactgcagtcactcccgatggcgccacc gttgaagttacggtgagagtagctgatatcaacgaccatgcaccagctttccctcaggct cgggctgccctgcagatacctgaacatacagctcttggcacacgctacccactggagcct gctcatgatgcagacgccggacgactaggaacccaagggtatgcgctatctggtgatggg gctggagagacctttcgactggagacacgtcctggtcctggtggagctccagtgcctgag ctggtcattgctggggaactggaccgggagaaccgctcacactacatgttgcagctcgag gcctatgatggtggctcacccccacggagagcccaggccctgctagatgtgacacttctg gatatcaatgaccatgccccagctttcaatcaaagccgataccatgctgtggtatctgag agtctggcccctggaagtcctgtcttgcaggtgtttgcatctgatgctgatgctggtgca aatggggctgtgacttatgagatcaacaggagacagagtgaaggtgatgggcccttctcc attgatgctcacacagggtttctgaaactggagcgcccactggactttgaacaaaggcga gttcatgaactggtggtgcaggcaagggatggtggggctcacccagagctgggttcagct tttgtgacagtgcatgtgcgagatgccaatgacaatcagccctccatgactgtcatcttc ctgagtgctgatggctccccccgggtgtctgaggctgccccaccgggacaacttgttgct cgaatctctgtgtcagatccggatgatggtgactttgcccacgtcaatgtgtccctggaa ggtggagagggccactttgccctgagcacccaagacagtgtcatctatctagtgtgtgtg gctcgaaggctggatcgggaggagagggatgtctataacttgcgagtcacggccaccgac tcaggctcaccaccacttcgggctgaagctgcctttgtgctacatgtcactgatgtcaat gacaacgcacctgcgtttgaccgccagctctaccgacctgagcctctgcctgaagtcgca ttgcccggcagctttgtggtacgggtgactgcccgggatcctgaccaaggcaccaatggt caggtcacttacagtctggctcctggcactcacactcactggttctccattgatcctacg tcaggcatcatcaccacagctgccacattggactatgaactagaacctcagccacagctt attgtggtggccacagatgggggcctgccccctttagtctcctctgccacagttagtgtg gccttacaagacgtgaatgacaatgagccccagttccagaggactttctacaatgcctcg ctgcctgaaggcacccagcccggaacctgtttcctgcaggtaacagccacagatgccgac agtggcccatttggcctcctctcctattccttgggtgctgggcttggagcttctgggtct cccccattccgcattgatgcccacagtggtgaggtgtgtaccacccggatcctggaccgt gaccagggaccttcaagctttgacttcacagtgacagccatcgatgggggaggtctcaag tccatggtgtacgtgaaggtgtttgtggcagacgagaatgacaacccacctcagttttac ccacgggagtacgctgccagcctgagtgctcagagcaccccaggcacagctgtgctgagg gtgcacgcccatgaccctgaccagggaccccatgggcggctttcctaccacatcctggct ggcaacagcccgccactctttgcattggatgcacactcaggactgctgacagtagcctgg cccttaggcagacgggctaattctgtggtgcagctggagatcggggctcaggatggaggt ggtctgcaggcagaacctattgcccgagtcaacatcagcattgtgcctggaacccccaca ccacctatatttgagcaactacagtatgttttttctgtgccagaggatgtggcaccaggc accagtgttggcgtagtccaggcacacaacccaccaggtcgcttagggcctgtgaccctc accctatcaggtggggacccccgagggctcttctccctagattcagcctcggggctatta aaaacacttcgtcctctggaccgggagcttctgggacctgtcctagagctagaggttcga gcaggcagcggaacccccccagttttctctgctgctcggatccgtgtgcttctggatgat gtgaacgataactctcctgccttccctgcacctgaagacactgtgttgttgccacaaaac actgctccagggactcctgtctatacactgcgtgctctagatcccgactcgggagctaac agtcgagtcacctttagtctacttgctggaggtgatggattgttcactgtggaccctacc acgggccacgtccggctcatgggacctctagggcctccagggggaccaccccatgagttg gaagtggaggcccaggatggaggctccccaccacgcaccagccactttcgacttcgtgtg gtgatacaggatttgggaatccatgggttggctccacgatttgacagccctacctaccga gtggacttgccttcaggcactaccactggaactcagatcttgcaagtgcaggcccaggca ccagatgggagccccgtcacttaccatcttgcagcagatggagccagtaacccctttggc ctggagtcacagagtgggtggctgtgggtacgggcagcattagaccgtgagtcccaggag ttatacacattgaaggtgatggctgtatctggttccaaagctgaattggggcaacagaca ggcacagccacagtgagggtcgttatcctcaaccaaaatgaccacagtccccgcttgtct gaagagcccacctttctggctgtagcagagaaccaacccccagggaccagtgtaggccga gtctttgccactgacaaagactcaggtcctaatgggcgtctgacctacagccttcaacag ctttcagaagacagcaaggccttccgcatccacccccagactggagaagtgactacactc caaaccctggaccgagagcaacagagcagcttccagctcctggtccaggtgcaggatgcg ggcagtccacctcgcagcgccacaggcactgtgcatgtcgcggtgcttgacctcaacgac aacagtcctaccttcctgcaggcttcaggggctgctggtggaggtctccctatccaggta ccagaccgagtgcctccaggaacactggtgacaactctgcaggccaaagatccagatgag ggggagaatgggaccatcctatacaccctaactggttctggctctgagctcttctctctg catcctcacacgggggagctgcacactgcggcatctctgattagagctgagaggcctcac tatgtgctaactcttagcgctcacgaccagggcagcccccctcgaagtgccagcctccaa ctgctcgtacaggtgcttccctcgactcgtatggtggagtcaccagatctcgtagaagct gactcagcggcaacagtgcctgtagtactgacagttacagcagctgaggggcttcgacct ggatccctgttaggttcggtggccccgcaggagccagctagtatgggcgtactcacctat actctggttggtggagccgaccccgagggcaccttcgctctggactcagcctcaggtcgc ctgtacttggcccgtgtcttggactttgagtctgggccggcttggcgcgcgctcacggtg cgcgccgaggggccgggaggtgcaggagcgcggctgatgagagtgcaggtgcgcgtgcaa gacgagaacgagcacgcgcccgcttttgcacgcgaccccctggcactggcgctacctgag aaccctgagcccggcgccacgctgtatactttccgtgcttcagacgcggatggcccaggt cccaacagtgacgtgcgataccgcctgctgaggcaggaacccccggttcccgccctgcgc ttggacgcgcgcaccggggcgctcagcgctcctcgtggtctggatcgggagaccacaccc gcgctgttgctgatcgtggaagccacagacagaccagccaatgccagccgccgcaaggca acgcgcgtctcggcgcgggtctttgtcacggatgaaaatgacaacgcccctgtcttcgcc tcaccatcacggatgcgcctcccagaggatcagcctcctgggcctgcggcgctgcacgtg gtagctcgggatccagatctgggggaggctgcccgtgtgtcctatcgtcttgcggctgga ggggatggccacttccggctacatgcgaccactggagcgctgtccgtggtgcggcccttg gaccgtgaacagcgagctgagcatgtactgacagtggtggcctcggaccatggctcgccg ccacgttcatccactcagctcctgactgtcagtgttgttgacgtcaacgacgaggcaccc gctttccctcagcaggagtacaacgtcatccttcgtgagaacagtccgcctggcacttct ctgctcacactgaaggcaactgaccctgaccttggggccaatgggcaagtgacttatggg ggtgtctctggcgagagcttctctctggacccaaacagtggagttcttacgactctgagg gctctggaccgggaggagcaggaggagatcaatttgacagtatatgcccgggacaggggc ttgccacccctgttaactcacatcacagtgcgagtgactgtggaagatgagaatgaccat agtccaacttttgggaacacccatctctccctggaagtgccagaaggccaggacccccaa acccttaccacactacgagcctctgatccggatgggggactcaacggacagctccagtac cgcatccttggtggggacccttcaggagcctttgcactagatctcacttctggggagttt ggcaccacgaggccactagaccgggaggtagagcctgcattccagctgcagatagaggcc agagatggaggccagccagcccttagtgcgaccttgcttgtgacagtgacagtgctggat gccaatgaccatgcgccagcctttcctgtgccttcttattctgtagaggtacctgaggat gcacctgtcgggaccctactgctgcaactacaggctcatgacccggatgagggggacaat ggccgtgtgatgtactacctgggtgcaggtacagcaggggccttcctgctggagcctacc tctggggaactgagcacagccacagccttggacagagagcactgtgccagctacgccttt tctgtgactgcagtggatggtgcagctgctgggcctctgagcactacagtaccaatcacc gtcacggtgcgtgatgtcaatgatcacgcacccgctttccccaccagtcctctgcgcctc cgcctaccccgcccaggtcctagcctcaacaaaccaaccctggctctggccacgcttcga gctgaagatcgagatgctggtgccaatgcctccattctataccggctggcaggcacacca ccacctggcaccactgtggactcttacactggtgaaatccgtgtggctcgatcccctgcg gctcttggacctcgggatcgtgtcctcttcatcgtggctactgaccttggccgcccagct cgctctgccactggtgtggtcattgttgggatacaaggagagcctgagcgtggaccccgc tttcccagagctaataatgaggctgtgctccgtgaaaatgcaccaccagggactccagtt atctccccaaaggctgtccattcaggaggctcaaatggaccaattacctatagcattctc agtgggaatgagagagggattttctccatccaacctagcacaggaaccatcacagttcag tcagcagaggggcttgactttgagacaaacccacggctacgactggtgctacaggcagag agtggaggagcctttgctttctcggtgctgaccctgacccttcaagatgccaatgacaat gctccccgtttcctgcagcctcactacgtggctttcctgccagagtcccgacccttggaa gggcccctgctgcaggtggaagcagacgacctggatcaaggctctggaggacagatctcc tacagtctggctgcatcccagccagcacggggcttgttccatgtagacccagccacaggc actatcactaccacagccatcctggaccgggaaatctgggctgaaacacggctggtactg atggccacagacagaggaagcccagcattggtgggctcagctaccctgacagtgatggtc atcgataccaatgacaatcgccccaccatcccccagccctgggagctccgcgtgtcagaa gatgcactgctgggctcagagatcgcacaggtgactgggaatgatgtggattctggacca gtgctatggtatgtgctgagcccatctggaccccaggatcccttcagtattggccgatat ggaggacgtgtctccctcacgggccccctggactttgagcaatgtgaccactaccaccta cagctgctggcacatgatgggcctcatgagggccatgccaacctcacagtgcttgtggaa gatgtcaatgacaatgtacccatcttctcacagagcctctaccaggtaatgatgttagag cacacccctcctggcagcgccattctctccgtctctgccactgacagagactcaggtgcc aatggtcacatatcctaccatctggcttcccctgctgagggcttcagtgtcgacactaac aatggaactctgttcacaacagtgggagcaatggccttgggccatgaggggccaggagtg gtagatgtggtgctggaagcacgagaccatggggctccaggccggtcagcacaggccacg gtgcatgtgcagctgaaagaccagaatgaccatgccccaagcttcacgttgccacactac cgtgttgctgtgtctgaagatttaccccctggttccaccctgctcaccctggaggccata gatgctgatggaagccgcagccatgctactgtagactacagcattatcagtggcaatcgg ggccgagttttccagctggaaccccgcctggctgaggttggggacggtgttgggccaggt ccccaggctttgggctgcctagtgttgcttgagcctctagactttgaaagcctgacacag tacaatttaactgtgaccgcagctgaccggggacagccaccccgcagttcagccgtgccc gtgactgtcactgtactggatgtcaatgacaacccacctgtctttactcgagcatcctac cgtgtgacagtacctgaggacatgcctgttggagctgagctattgcatgtggaggcctct gatgctgaccctggacctcatggccttgtgcatttcacccttagctcgggtgatccttta ggcctctttgagctggatgagaactcgggtgctctgaggctggcccaccctctggactgc gaaacccaggctcaacatcagcttgtggtgcaggcagctgaccctgctggaacacacttt gctctggtaccggtgacagttgaggtccaggatgtgaatgaccatggtccagccttccca ttgagcctgctcagtactagccttgctgagaatcagcctccaggcactcttgtgaccacg ctacatgcaatggatggggatgctgggacttttggtagactccgatacacactgttggag gcagtgccagggcccgagggtcgtgaggcattctcactgaacagctcaacaggggaattg cgggcacgggtaccttttgactatgagcacacaggaagcttccgtctactagtgggcgct gctgatgctgggaatctctcggcttctgtcaccgtgtcggtgctgatcactggagaagat gaatatgaccctgtattcctggctccatctttccatttccaagtgcctgaaggtgcccag cgtggccacagcctgggccatgtgcaggccacagatgaggacggaggtgctgatggtctg gtgctctattcgctggctacctcttccccctattttggtatcaaccagacaacaggtgct ttgtacttgcgagtggacagtcgggcaccaggaagtggaacagccacctctgggggtggg ggccggacccgacgtgaagcaccgcgggagttaaggctggaggtagtagcgagagggcct ctgcctggatcgcggagtgccacagtgcctgtgactgtggatattacccacactgctcta ggcctggcacctgacctcaacttgctattggttggggctgtggcagcttctttgggagtt gtggtggtgctggccctggcagctcttgtcctgggccttgttcgggcacggagccgcaag gctgaggcagcccctggcccaatgtcacagacagcacccatagccagtagctctttacag aaactgggtcgggaaccccccagtccaccaccctctgaacacctgtatcatcagactctt cccagctatggtgggccaggagctggaggtccctacccccgtggtggctccttggaccct tcacattcaagtggccgaggctcagcagaggctgcagaggatgatgagatacgcatgatc aacgagtttccccgtgtggccagtgtggcctcctccctggccgcccgaggccctgactcg ggcatccagcaggatgcagatggactgagtgacacgtcttgcgagcctcctgcccctgac acctggtacaagggcaggaaggcagggctgctgctgccaggcgcaggagccactctgtac cgagaggaggggcctccagccactgctacagccttcctggggggctgtggcctgagccct gcacccactggggactatggcttcccagcagatgggaagccatgtgtagctggagcgctg acggccatcgtggctggtgaggaagagctccgtggcagctataactgggactacctgttg agctggtgccctcagttccagcctctggccagtgtcttcacagagattgctcggctcaag gatgaagcccgtccatgtcctcccgctccccgtattgacccaccacccctcatcactgct gtggcccacccaggagccaagtctgttcccccaaagcctgcaagcacggctgccacccgg gccatcttcccaccagcctctcaccgctcccctatcagccatgaaggctccctctcctca gctgccatgtcccccagcttctcaccctcactgtctcctttggctgctcgctctcctgtt gtctcaccattcggggtagcccagggcccctcagcttcagcactcagcacagagtctggc ctggagcctcccgatgacacagagctgcgcatctag

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