Rattus norvegicus (rat): 313061
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Entry
313061 CDS
T01003
Symbol
Virma
Name
(RefSeq) protein virilizer homolog
KO
K22910
protein virilizer
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
313061 (Virma)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
313061 (Virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
313061
NCBI-ProteinID:
NP_001101385
RGD:
1559904
Ensembl:
ENSRNOG00000014664
UniProt:
A6II64
A0A8I5ZMM7
LinkDB
All DBs
Position
5:29758529..29822030
Genome browser
AA seq
1862 aa
AA seq
DB search
MAVDSSMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSGLPDNRAYG
ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL
TLAIYGSVDRVLSHDRDSPPPPPPPPPPPQPQPTLKRSLKHADGEKEDQFNGSPPRPQPR
GPRTPPGPPPPDDDEDDPMSLPVSGDKEEDVPHREDYFEPISPDRNSVPQEGQYSDEGEV
EEEQQEEGEDDEDDVDVDEEEDEDEDDCHTVDSIPDDDEEDEEEEGEEDEEGEGDDGYEQ
ISSDEDGIADLERETFKYPNFDVEYTPEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE
IEINRMKDQGPDKENSGAIEASLKLTELLDLYHEDRGAKWVTALEEVPSLIIKGLSYLQL
KNTKQDSLGQLVDWTMQALNLQVAFRQPIALNVRQLKAGTKLVTSLAECGAPGVTELLQA
GVISVLFDLLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRSTQSEKSGYQKLLELILL
DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHIAEKTSSVPNPSEPDHDTDAVLERANPD
YENEVEASMDMDLLESSNISEGEIEKLINLLEEVFHLMETAPHTMIQPPVKSFPTIARIT
GPPERDDPYPVLFRGPGFGFEHSNSGLQPSATPVPDGPMASSGLCGHCTHMVHRHTCKQN
THNIRYLHSHHFLELVTLLLSIPITSAHPGVLQATKDVLKFLAQSQKGLLFFMSEYEATN
LLIRALCHLYDQDEEEGLQSDGVDDAFALWLQDSTQTLQCVTELFSHFQRCTASEETDHS
DLLGTLHNLYLITFNPVGRSAVGHVFSLDKNLQSLITLMEYYSKEALGDSKSKKSVAYNY
ACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIPN
LIEYVKQNIDNLMTAEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMD
TFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTELLRGGSFEFKD
MRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNT
WSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDISVALNTRKLWSMH
LHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPTALLIMRTVLDLIVEDLQST
SEDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTIKGDEKYAEIFQDLLALVRSP
GDSVIRQQCVEYVTSILQSLCDQDIALILPSPSEGPGSELEQLSNSLPSKELMAAICDCL
LATLANSESTYNCLLTCVRTMMFLAEHDYGLFHLKSSLRKNSSALHSLLKRVVSTFSKDT
GELTSASLDFMRQILNSDAMGCCGDDSGLMEVESAHPPRTMSINAAELKQLLQSKEESPE
SLFLELEKLVLEHSKEDDSLESLLDNVIGLKQMLESSGDPLPLSDQDVEPVLSAPESLQN
LFNNRTAYVLADVMDDQLKSMWFTPFQAEEIDTDLDLVKVDLIELSEKCCSDFDLHSELE
RSFLSEPSSPGRAKTTKGFKLGKHKHETFITSSGKSEYIEPAKRAHVVPPPRGRGRGGFG
QGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVVPQDGIPPPKRPLKVSQKISSRGGF
SGNRGGRGAFHSQNRFFTPPASKGNYSRREGTRGSSWSAQNTPRGNYNESRGGQSNFNRG
PLPPLRPLSSTGYRPSPRDRASRGRGGLGPSWASTNSGSGGSRGKFVSGGSGRGRHVRSF
TR
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggactcgtccatggagctgctatttttagatacttttaaacatccaagcgct
gagcaaagttctcatatagatgtggttcgttttccatgtgtggtttatatcaatgaagtc
cgagttatacccccgggagtacgagcccatagtggcttacctgacaacagagcatatggg
gaaacatctcctcacacatttcaactagacttatttttcaataacgtaagcaaaccaagt
gctccagtttttgataggttgggaagtctggaatatgatgagaatacgtctatcatcttt
agaccaaactcgaaggtaaatactgatggtctggtgctaagaggctggtacaactgtctg
accctggcaatatatggatcggtggatagagtgctaagccatgacagagactctcctcca
cctcctcctccacctccaccccctccccagccacagccgacactgaaaaggagcctaaaa
cacgctgatggtgagaaagaagatcagtttaatggaagtcctccaagacctcagccccgg
ggaccaagaactcctcccggacctcctccacccgatgacgatgaggatgaccctatgtct
ttgccagtgtctggtgacaaagaagaagatgttccccacagagaagattactttgagccc
atttctcctgataggaattccgtcccgcaggaaggtcagtattccgatgagggggaggtc
gaagaagaacagcaggaagagggagaagatgatgaagatgatgtggatgtagacgaagaa
gaggatgaagatgaggatgactgccatacagtggacagtatccctgatgatgatgaggaa
gatgaagaggaggagggtgaagaagatgaagaaggtgaaggggacgatggctacgagcag
atctccagtgatgaagatgggattgctgacttggaacgtgaaactttcaagtatccaaac
ttcgatgttgaatacactccggaagacctggcgtctgttcctcctatgacatacgacccc
tatgacagggagctggtaccactcttgtatttcagctgcccatacaaaactacttttgaa
attgaaatcaatagaatgaaggatcagggtccagataaagagaattcaggggcaatagaa
gcttcgttgaagttaactgagctgctagatctgtatcacgaagacaggggcgcaaagtgg
gtgacagctctagaagaagtcccaagtttaattataaaaggattaagctatttgcagttg
aagaacacaaaacaagactcccttggccagttggtagactggacaatgcaagctttaaat
ttacaagtagcctttcgccagcccatagccttaaatgtcagacagctcaaagctgggacc
aagctagtgacctcattagcagaatgtggggctccaggagtcacagaattgctacaagca
ggagtgatcagtgtattgtttgatctcctatttgctgatcatgtctcatcgtcccttaag
ttaaatgcttttaaagctttggacagtgtcattagcatgaccgaaggaatggaggccttt
ttaagaagcacccaaagtgagaaaagtggctatcaaaaactgctggagctcatacttcta
gatcagacggtgagggttgtcactgctggctcagctattcttcaaaaatgccatttctat
gaagtcttgtcagagattaaaagactcggtgaccatatagcagagaagacttcatctgtt
cccaaccccagcgagcctgatcacgacacagatgctgtactggagagagcaaacccagat
tatgagaatgaagtagaagcttctatggacatggatctattggaatcctcaaatataagc
gaaggcgaaatagaaaagcttattaatcttttagaggaggtttttcatctaatggaaact
gcacctcacacaatgatccaacctcctgttaagtctttcccaacaatagcacggattact
ggacctccagagagggatgacccatatcctgttctctttagagggcctgggtttggtttt
gaacactcaaatagtggcttacaaccatcagctacgccagttccagacggtccaatggcc
tcttctggcctatgtgggcactgtacacacatggtacacaggcatacatgcaagcagaac
acccacaacataaggtatcttcacagccatcacttcctggagttggtcaccttgcttctg
tcgattccaataacaagtgcccatcccggagtgctgcaagccaccaaggacgttttaaag
tttctcgcacagtcacaaaagggccttctcttttttatgtcagaatatgaagcaacaaac
ttgttgatccgagctctgtgccacctttacgatcaagacgaagaggagggccttcagtct
gacggggttgacgatgcctttgccttgtggctgcaggactcaactcagactctccagtgc
gtcacagaactgttcagccattttcagcgttgtacagccagtgaggaaactgaccattcg
gatctcctgggcaccctccacaatctttatttgattacttttaatcctgttggaagatca
gctgttggccatgttttcagccttgacaaaaaccttcagagtctcattactctaatggag
tactattccaaagaagccctaggtgattccaagtctaagaagtcagtagcttataattat
gcatgcatacttattctggtggtggttcagtcttccagtgatgtccagatgctggagcag
catgcagcatctctcttgaagctttgcaaagcagatgaaaataatgctaaactgcaagaa
cttggcaagtggcttgaacctctgaaaaacctcagatttgaaattaactgcatcccaaat
ctaattgaatatgttaaacagaatattgataacttgatgactgcagaaggagttggcctt
accactgccttacgtgttctctgtaatgtggcttgtccaccacctcctgtagaaggtcaa
caaaaagacctgaagtggaaccttgctgttattcagcttttttctgctgaaggaatggac
acctttattcgggttctgcaaaagttgaacagtattttgacacagccttggaggctccat
gtgaacatggggactaccctgcacagagttactaccatttcaatggctcgctgcacgctc
acccttcttaaaactatgctgacagagctcctgcgaggcggatcctttgagtttaaggac
atgcgagttccttcagcactcgttactttacacatgctcctgtgctctatccctctctca
ggtcgtttggatagcgatgaacagaaaattcagaatgatatcattgatatcttattgact
tttacacaaggagttaatgagaagctcacaatctctgaagagactctggccaataatact
tggtctttaatgttaaaggaagttctctcttccatcttgaaggttcctgaaggcttcttc
tctggactcatactcctttcagagctgctgcctcttcccttgcccatgcagaccacgcag
gttattgagccacatgatatatcagtggcactcaacacccgaaaattgtggagcatgcac
cttcatgttcaagcaaagttgctccaagaaatagttcgttctttctctggcacaacctgc
cagcccattcagcatatgttacggcgtatttgtgttcagttgtgtgaccttgcctctcca
actgctcttctgatcatgagaactgtgttggatttgattgtagaagacttgcaaagcact
tcagaagataaggaaaagcagtatactagccaaaccaccaggttgcttgctcttctcgat
gctctggcttcacacaaagcttgtaaattagctattttgcatctaattaatggaactatt
aaaggcgatgaaaagtatgcagagatattccaggatcttttagctttggtgcgatctcct
ggggacagtgttattcgccagcagtgtgtggaatatgtcacatccattttgcagtctctc
tgtgaccaggacatcgcactcatcttgccgagcccttctgaaggtcccggctctgagctg
gagcagctttccaactccctcccgagtaaagagctgatggctgccatctgtgactgtctg
ctggccacactagccaactccgaaagcacttacaactgtctgctgacgtgtgtgcgcaca
atgatgtttcttgcagagcatgattatgggttgtttcacttaaaaagttctttaaggaag
aacagtagtgctctgcatagcttgctgaagcgagtggtcagcacattcagtaaggacact
ggcgagcttacgtcagcgtctctggacttcatgagacagatcctcaactctgatgcaatg
ggctgttgtggagacgacagtggtctcatggaggtagagagcgctcacccaccccggacg
atgagtattaacgctgcagagctaaaacagctcctacagagcaaagaagagagtccagag
agtctgtttcttgaactagagaagctcgttttggaacactcaaaagaggatgacagtctg
gagtccctgctggataacgtaattgggctgaagcagatgctggagtcttcaggtgaccct
ttgcctctcagtgaccaggatgtagagccagtcctgtcagctccagagtctctccagaat
ctattcaacaacaggactgcgtatgtgttggctgatgtcatggatgatcagttgaaatct
atgtggtttactccatttcaggctgaagagatcgatacagatctggatttggtaaaggtt
gacttaattgagctctcggaaaagtgctgcagtgactttgacctgcactcagaattggag
cgctcctttttgtcagaaccgtcatctccaggaagagccaagaccacgaaggggtttaaa
ctagggaagcataagcacgagacgttcataacttcaagtggaaaatctgaatacattgaa
cccgccaaacgagctcacgttgtgcccccaccaagaggccggggccggggaggatttggc
cagggcatccggccgcatgatattttccgtcagagaaagcagaacacgagtaggccaccg
tctatgcatgtggatgactttgttgcagccgaaagtaaagaagtggttcctcaagatgga
atacctccacccaaacggccgctcaaggtctctcagaagatttcctcccgcggtggattt
tcaggcaaccgaggagggcggggtgcttttcacagtcagaacaggtttttcacaccgcct
gcttcgaaaggaaactacagtcgtcgggaaggaacaagaggctccagttggagtgctcag
aatactccgagaggaaattataacgaaagccgagggggccagagcaacttcaacaggggc
cctcttccgccattacggccacttagctccacaggttaccgccctagtccccgggatcga
gcttctcggggccgtggggggctcggaccgtcctgggccagtacaaatagcggcagtgga
ggctcacgaggaaagtttgttagtggaggcagtggtagaggccgtcatgtacggtccttt
actcgatag
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integrated database retrieval system
