KEGG   Rattus norvegicus (rat): 315820
Entry
315820            CDS       T01003                                 
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
  KO
K10357  myosin V
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    315820 (Myo5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    315820 (Myo5c)
   04131 Membrane trafficking [BR:rno04131]
    315820 (Myo5c)
   03029 Mitochondrial biogenesis [BR:rno03029]
    315820 (Myo5c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    315820 (Myo5c)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     315820 (Myo5c)
   mRNA cycle factors
    P-body specific factors
     315820 (Myo5c)
Membrane trafficking [BR:rno04131]
 Others
  Actin-binding proteins
   Myosins
    315820 (Myo5c)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    315820 (Myo5c)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     315820 (Myo5c)
SSDB
Motif
Pfam: Myosin_head DIL IQ Myosin_N AAA_22 nSTAND3 AAA_16 AAA_13
Other DBs
NCBI-GeneID: 315820
NCBI-ProteinID: NP_001101637
RGD: 1309994
Ensembl: ENSRNOG00000008356
LinkDB
Position
8:84870031..84946996
AA seq 1742 aa
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRVGDQVLRLLLEDGTELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEEKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVDDR
ADMAETQKTFTLLGFKKDFQMDVFKILAAILHLGNVQVTTVGNERSAVSEDDSHLKVFCE
LLGLETIKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVEQINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEVLRASKFHLCAAFFQESPVPSSPF
GAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLFLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGVLMTQQELSLSDKKEVCKVV
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
RAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAH
TRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALRVGDLEKVQRLEAELEKAATHRHSYEEKGRRYRDSMEERLSK
LQKHNAELESQRERAEQSLQERTEELKEKMDQLTRQLFDDVQKEEQQRLLLEKSFELKTQ
AYEKEIESLREEIKALKDERTQLHHQLEEGRVTSDSLKGEVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLKEQAEKMEGKQEEPFSHLNRGLEEEGRQ
GKAVEAQSETHPEGKERLVGKIQEPQEAIKFPKKQAEAEEEVESILRQEASRLSLENRDL
EEELDMKDRMIRKLQDQVKTLTRTIEKANSVPLPSGSREYLGMLEYKKEDETKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEM
LSFWLSNTCHFLNCLKQYSGEEEFMKCNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQF
ILVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFYLIGAVTLNSLLLRKDMCSCRKGMQIRCNISFLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEISQCCTSLSAVQIIKILNSYTPIDDFE
KRVNPSFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLR
RL
NT seq 5229 nt   +upstreamnt  +downstreamnt
atggcggtggccgagctctacgcgcagtacaacagggtttggatcccagatcctgaagaa
gtttggaagtctgctgaaattgcgaaggactacagagtgggtgaccaagtcctccgactc
ttgcttgaggatggcacggaactggattaccctgtggacccagggtcactgcctccgctt
cggaacccagacatcctggtgggtgagaatgatctcacagccctcagctacctccatgag
cccgcggtgctgcacaacctcaggatccgcttcgcagagtccaaactcatctacacctac
agcggaatcattttggtggctatgaatccttacaaacagctgccaatatatggggatgcc
atcatccacgcctacagcggacagaacatgggcgacatggacccacacatctttgcggtt
gcagaggaggcctacaagcagatggccaggaacaataggaatcagtccataatcgtgagt
ggggaatctggagccgggaagactgtctctgcaagatacgccatgaggtactttgccacc
gtcagcaagtccagcagtaacgcccatgtggaggaaaaagtcctggcatccaatcccatc
actgaggctgttggaaatgccaagaccactcgcaatgacaacagcagtcggtttgggaag
tacacggaaatcagctttgatgagagaaaccagatcatcggcgccaatatgagaacctac
ctcctggagaagtccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
taccagctttgtgcatccgcacagcagtcagaatttaaacaccttaaactggggagtgca
gaagagttcaactacacaagaatgggtgggaacactgtcattgaaggcgtcgatgacaga
gctgacatggcggagacccagaagaccttcacattgctgggattcaagaaagattttcag
atggatgtttttaagatcctagctgccatcctgcatctgggcaatgtgcaggtcaccaca
gtgggcaacgagaggtctgcagtcagtgaggatgacagtcacctgaaggtgttctgtgag
ctcttgggcctggagactatcaaagtggctcagtggctatgcaaccgaaaaatagtgacc
tcctcagaaactgtggtgaagcccatgaccaggcctcaggccatcaatgccagggacgcg
ctggccaaaaagatctacgctcacctgttcgacttcattgtagagcaaatcaatcaggca
ttgcacttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acgtttgatgtaaacagctttgaacagttctgcatcaattacgctaacgaaaagctgcag
cagcagtttaacctgcacgtctttaaacttgagcaagaggaatacatgaaggaggacatc
ccttggactctgatagacttctatgacaatcaacctgtgattgacctgatcgaagccaaa
atgggcattttggagttgctggatgaagaatgcttgttgcctcatggaactgatgaaaac
tggcttcaaaagctgtataacaattttgtcaacaagaactctttattcgagaagcctaga
atgtcaaactcatccttcatcatccaacattttgctgacaaggtggagtaccagtgtgag
gggttcctggagaagaacagagacactgtctacgacatgctggttgaagtcctcagagca
agcaagtttcatctctgtgccgccttttttcaagaaagccctgttccgtcttctcccttt
ggggcaatgatcacagtcaaatctgcaaagcaggtcatcaagccgaacaccaagcacttc
cggaccacggttgggaacaagttccgcagctccctgttcttgctcatggaaaccctcaat
gccaccacaccccactacgtccggtgcatcaagccaaatgatgagaagctgccctttgag
tttgactctaaacggattgtccagcagctgcgagcctgtggtgttttagaaacgattcga
ataagtgcccagagctacccttccaggtggacatacctcgagttctacagtcgctacggt
gtcctcatgacccagcaggagctgtccctcagtgataagaaggaggtttgcaaagtggtt
ttgcacaggctcatccaggattctaaccagtaccagtttggcagaaccaagattttcttc
agagcaggacaagtggcttatttagagaaactccgcttggataaactgaggcagggctgt
attgtgatccaaaagcatgtgcgtggctggctgcagaggaagaagttcctccgagagaga
cgagctgccctgacaatccagcagtacttccggggccagcagacagtgaggaaggccatc
actgccactgccttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggc
tacctggtccgtaacctgtaccagctgatccgtgtggccaccatcaccatccaggcacac
accaggggcttcctggccaggaggcggtaccggaagttgctgcaggagcacaaggcagtg
atccttcagaagtatgcgagggcatggctggcccggcgcagattccagaacatccgcagg
ttcgtgctcaacattcagctgacttacagggtccagcgcttgcagaagaagctggaggat
cagaacagagagaaccacgggctggtggagaagctgacaagcctggccgctctgcgggtt
ggtgatctggaaaaggttcagaggctggaggcagagctggaaaaagcagcgacccacagg
cacagctatgaggagaagggccggagatacagggactcgatggaggagagattgtcgaag
ctgcagaaacacaatgcagagctggagtcgcagagagagcgagcagagcagagtctacaa
gagaggactgaggagctgaaagaaaaaatggaccagctcaccaggcagctgtttgatgac
gtacagaaagaagaacagcagagactacttcttgaaaaaagttttgagctgaaaacacaa
gcttatgagaaagagatagagtctctgagagaagaaattaaagccctcaaggatgagagg
acgcagctgcaccaccagctggaggagggacgggtcacctctgacagcctgaagggggag
gtggcccgtctaagcaagcaggcaaagaccatctctgagtttgagaaggagatagaactg
ctgcaggcacagaagatagatgtggaaaaacatgtgcagtcacagaagcgggagatgaga
gaacggatgtcagaggtcaccaagcaacttttggagagctatgacattgaagacgttaga
agcaggctctccgtggaagatctggaacatttaaatgaagatggagaactttggtttgcc
tacgaaggactaaagaaagcaactcgcgttctggagagccatttccagtctcagaaggat
tgctatgaaaaagagattgaaggtctgaacttcaaagtcgtgcatctgagccaagaaatc
aaccacctgcagaagctgttcagagaagagacagacatcaatgaaagtattcgtcatgaa
gtcaccaggctgacatcagaaaacatgatgatcccagactttaagcagcagatttcagag
ctggagaggcagaagcaggatctcgaatcccgcctgaaggagcaggcggagaagatggaa
ggaaagcaggaagaaccattcagccacctgaaccgaggcctagaagaggagggaaggcag
ggcaaggccgtggaagcacagagcgagacgcatccggaagggaaggagaggctggtgggt
aagatccaagaaccacaggaggccatcaagttcccaaagaagcaagcagaagctgaggag
gaagtcgagagtattctccgacaagaggcgtctcggctgtctttggaaaacagggatctt
gaggaagagttagacatgaaggacaggatgattaggaagctacaggatcaagtcaagact
ctgaccaggacgattgaaaaagccaacagtgtgcccctgccctcgggatccagggagtac
ctgggaatgctggagtacaagaaagaagacgagaccaagctcattcaaaacctcattctt
gacctgaagccccgaggcgtggtggtgaacatgatccctgggctgccagctcacatcctg
ttcatgtgtgtgcggtatgcagactccctgaacgatgccaacatgctcaaatccctcatg
aacagtgctattaacggcatcaagcatgtggttaaggaacactttgaagatttggagatg
ctgtccttctggctttccaacacttgtcattttctcaactgcctgaagcagtacagtgga
gaagaggaattcatgaagtgtaacagcccacagcagaataagaactgcttgaacaatttt
gatcttacagaatacagacagattctgagtgatgtggctatacgaatttaccatcagttc
atcctcgtgatggaaaacaatctccagccgataatagtgccaggcatgctggagtacgag
agtctgcagggcatttccggtctgaagcccactggtttccggaagcgctcatccagcatc
gatgacaccgatgcctataccatgacgtccatcctgcagcagctgagttacttctacagc
accatgtgtcagaacggcctggaccctgagattgtgaggcaggcggtcaagcagctgttc
tacctgatcggggcggtgaccctcaacagcctcctccttcgaaaggacatgtgctcctgc
aggaaagggatgcagatcaggtgcaacatcagcttcctggaagaatggctaaaagataag
aatttgcagaacagcttagccaaggagactctggagcccctctctcaggcagcctggttg
cttcaggttaagaagaccacagacagcgatgccaaggagatctcccagtgctgtacttcc
ctgtctgccgtgcagatcataaagatccttaattcatacacacctatagacgactttgag
aaaagagtcaatccatccttcgttcgcaaagtacaggctcttctgaataaccgtggtgac
tcgtcacagctgatgctggacactaaatatctttttcaagtcacatttcctttcaccgcc
tcaccgcacgccctggagatgacccagatccccagcagcttcaagctcggctttctgcgg
agactgtag

DBGET integrated database retrieval system