Rattus norvegicus (rat): 50688
Help
Entry
50688 CDS
T01003
Symbol
Cacnb1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04010
MAPK signaling pathway
rno04260
Cardiac muscle contraction
rno04261
Adrenergic signaling in cardiomyocytes
rno04921
Oxytocin signaling pathway
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
50688 (Cacnb1)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
50688 (Cacnb1)
09153 Circulatory system
04260 Cardiac muscle contraction
50688 (Cacnb1)
04261 Adrenergic signaling in cardiomyocytes
50688 (Cacnb1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
50688 (Cacnb1)
05412 Arrhythmogenic right ventricular cardiomyopathy
50688 (Cacnb1)
05414 Dilated cardiomyopathy
50688 (Cacnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
50688 (Cacnb1)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
50688 (Cacnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
50688
NCBI-ProteinID:
NP_059042
RGD:
68382
Ensembl:
ENSRNOG00000004518
UniProt:
P54283
LinkDB
All DBs
Position
10:complement(83494509..83515164)
Genome browser
AA seq
597 aa
AA seq
DB search
MVQKSGMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQGSA
ESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVP
VQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQTLRQNR
LSSSKSGDNSSSSLGDVVTGTRRPTPPASAKQKQKSTEHVPPYDVVPSMRPIILVGPSLK
GYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLA
EVQSEIERIFELARTLQLVALDADTINHPAQLSKTSLAPIIVYIKITSPKVLQRLIKSRG
KSQSKHLNVQIAASEKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPP
NPLLNRTMATAALAASPAPVSNLQGPYLASGDQPLDRATGEHASVHEYPGELGQPPGLYP
SNHPPGRAGTLRALSRQDTFDADTPGSRNSAYTEPGDSCVDMETDPSEGPGPGDPAGGGT
PPARQGSWEEEEDYEEEMTDNRNRGRNKARYCAEGGGPVLGRNKNELEGWGQGVYIR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtccagaagagcggcatgtcccggggcccttacccaccttcccaagagatccctatg
gaggtcttcgaccccagcccacagggcaaatacagcaagaggaaagggcggttcaaaagg
tcagatgggagcacctcctcagataccacatccaacagctttgtccgtcagggctcagca
gagtcctacacgagccggccgtcagactccgacgtgtccctggaggaggaccgggaagcc
ttaaggaaggaggcagagcgccaggccttagcccagctcgagaaagccaagaccaaacca
gtggcctttgctgttcggacaaatgttggctacaatccgtctccaggagatgaggtgcca
gtgcagggagtggccatcacctttgagcccaaggacttcctgcacatcaaggagaaatac
aataatgactggtggatcgggaggctggtgaaggaaggctgtgaggttggtttcatcccc
agccctgtcaaactggacagccttcgcctgctgcaggaacagacgctgcgccaaaaccgc
ctcagctccagcaagtcaggtgacaactccagttccagtctgggagatgtggtgactggc
acccgccgccccacaccccccgccagtgccaaacagaagcagaagtcgacagagcacgtg
cccccctatgacgtggtgccttccatgaggcccatcatcctggtgggaccatcgctcaag
ggctatgaggtaactgacatgatgcagaaggcgttgtttgacttcttgaagcatcggttt
gatggcaggatttccatcacccgggtaacggctgacatttccctggccaagcgctcggtc
ctcaacaaccccagcaaacacattatcatcgagcgctccaacactcgctccagcctggct
gaggtacagagtgaaatcgagcggatcttcgagctggcccggaccttgcagctggttgcc
ctggacgccgacaccatcaaccacccagcccagctctctaaaacctcgctggcccccatc
attgtttacatcaagatcacatcccccaaggtactgcagaggctcatcaaatcccgaggg
aagtctcaatccaaacacctcaatgtccaaatagcagcctcggagaagctggcacagtgt
ccccccgaaatgtttgacataatcctggacgagaaccaattggaagatgcctgcgagcac
ctggcggagtacttggaagcctactggaaggccacacacccgcctagcagcacgccaccc
aatccgctgctgaaccgcaccatggctaccgccgctctggctgccagccctgcccccgtc
tccaacctccagggaccctaccttgcttccggggaccagccgctggaccgggccactggg
gagcatgccagtgtgcacgagtaccccggggagctgggccagcccccaggcctttacccc
agcaaccacccacctggccgggcaggcaccctgcgggcgctatcccgccaagacaccttt
gatgctgacacccccggcagccgaaactctgcctacacggagccaggagactcgtgtgtg
gacatggagacagacccctcagagggcccagggcctggagaccctgcagggggaggtaca
ccaccagctcggcagggctcctgggaagaggaggaagattatgaggaggagatgaccgac
aacaggaaccggggccggaataaggcccgctactgtgcggagggtggtgggccggttctg
gggcgcaataagaatgagctggagggctggggacaaggcgtctacatccgctga
DBGET
integrated database retrieval system
