Rattus norvegicus (rat): 54133
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Entry
54133 CDS
T01003
Symbol
Pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
54133 (Pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
54133 (Pdlim1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
54133 (Pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
54133
NCBI-ProteinID:
NP_059061
RGD:
68324
Ensembl:
ENSRNOG00000016166
UniProt:
P52944
LinkDB
All DBs
Position
1:complement(248991818..249040409)
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AA seq
327 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSS
MTHLEAQNKIKGCVDNMTLTVSRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPAPGTRVITNQYNSPTGLYSSENISNFNNAVESKTSASGEEANSRPSAQP
HPSGGLIIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESDGKGDPNKPSGFRSVKA
PVTKVAASVGNAQKLPICDKCGTGIVGVFVKLRDHHPHPECYVCTDCGINLKQKGHFFVG
DQIYCEKHARERVTPPEGYDVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagattgttctccagggcccgggaccctggggtttccgactcgtgggc
ggcaaggactttgagcaacctctcgccatttcccgggtcactcccgggagcaaggctgct
atagctaacttatgcataggagatttgatcacagccattgatggggaagataccagcagt
atgacacacttggaagctcagaacaaaatcaagggctgcgtagacaacatgacgctcaca
gtatccaggtctgagcagaagatttggtctcctctagtgaccgaggaggggaaacgtcac
ccctacaagatgaatttagcgtcggaaccccaagaagtcctgcacatcggaagtgcccac
aaccgtagtgctatgccatttaccgcctcacctgctcctggcacccgggtcatcacaaac
cagtacaacagccctaccggcctctactcatctgaaaacatctctaacttcaacaatgca
gtggagtcaaagacctcagccagtggggaggaggcgaacagcaggccctcggctcagcct
catccctccggcggccttatcatcgacaaggaatccgaagtttacaagatgcttcaggag
aagcaagagttaaacgagccccccaaacagtccacatcattcctggttctgcaggagatc
ctggagtcggatgggaaaggggaccccaacaagccatcaggatttagaagtgttaaagct
ccagtcaccaaagtggctgcatctgttggaaatgctcagaagctgcccatctgtgacaaa
tgtggaaccggcattgttggtgtgtttgtgaagctgagggaccatcatccccaccctgaa
tgttatgtgtgcaccgactgtggcatcaacctgaaacagaagggccatttctttgtaggg
gatcagatttattgtgaaaagcatgcccgggagagggtcacaccacctgagggctatgat
gtggtcacagtgttccccaagtga
DBGET
integrated database retrieval system