Rattus norvegicus (rat): 54257
Help
Entry
54257 CDS
T01003
Symbol
Grik2
Name
(RefSeq) glutamate receptor ionotropic, kainate 2 precursor
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
rno04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
54257 (Grik2)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
54257 (Grik2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
54257 (Grik2)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
54257 (Grik2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
54257
NCBI-ProteinID:
NP_062182
RGD:
2733
Ensembl:
ENSRNOG00000000368
Vega:
OTTRNOG00000001092
UniProt:
P42260
Structure
PDB
LinkDB
All DBs
Position
20:complement(53717564..54415283)
Genome browser
AA seq
908 aa
AA seq
DB search
MKIISPVLSNLVFSRSIKVLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
SLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGK
PANITDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEI
RLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISI
LYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSD
VVENNFTLLNSFWFGVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLT
VERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKS
NEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITI
AILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVG
EFLYKSKKNAQLEKRSFCSAMVEELRMSLKCQRRLKHKPQAPVIVKTEEVINMHTFNDRR
LPGKETMA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatttccccagttttaagtaatctagtcttcagtcgctccattaaagtcctg
ctctgcttattgtggatcggatattcgcaaggaaccacacatgtgttaagattcggtggt
atatttgaatatgtggaatctggccccatgggagcagaagaacttgcattcagatttgct
gtgaataccatcaacagaaacaggactttgctgcccaacaccactttaacttatgatact
cagaagatcaatctctatgacagttttgaagcatctaagaaagcttgtgatcagctgtct
cttggggtggctgctatcttcggtccttcacacagttcatcagccaatgctgtgcagtcc
atctgcaatgctctgggggttccccacatacagacccgctggaagcaccaggtgtcagac
aacaaggattccttctacgtcagtctctacccagacttctcttccctgagccgcgccatc
ttggatttggtgcagttttttaagtggaaaactgtcacagttgtgtatgacgacagcact
ggtctcattcgcttgcaagagctcatcaaagctccatcgaggtacaatcttcgacttaaa
attcgtcagctgccagctgataccaaagatgcaaaacctttgctgaaggagatgaaaaga
ggcaaggagttccacgtgatcttcgactgcagccatgagatggcagcaggcattttaaaa
caggcattagctatgggaatgatgacagaatactatcactatatatttacaactctggac
ctctttgctcttgacgtggagccctacagatacagtggcgtaaatatgacagggttcagg
atactaaatacagagaatacccaagtctcctccatcatcgaaaagtggtctatggaacgg
ttacaggcgcctccaaaacctgactcaggtttgctggatggatttatgacgactgatgct
gctctgatgtatgatgcagtgcacgttgtgtctgtggctgtccaacagtttccccagatg
acagtcagctccttgcaatgcaatcgacacaaaccctggcgctttgggacccgcttcatg
agtctaattaaagaggctcactgggaaggtctcacaggcagaataacatttaacaaaacc
aatggattacggacagattttgatttggatgtgatcagtctcaaggaagaaggtctggag
aagattggaacttgggatccagccagtggcctgaatatgacagaaagtcagaaaggaaag
ccagcaaatatcacagactcattgtctaatcgttctttgattgttaccaccattttggaa
gaaccgtatgttctgtttaagaagtctgacaaaccactctatgggaatgatcgatttgaa
ggctactgtattgatctcctacgagagttatctacaatccttggctttacatatgagatt
aggcttgtggaggatgggaaatatggagcccaggatgatgtgaacggacaatggaatgga
atggttcgtgaactaatcgatcataaagctgaccttgcagttgctccactggctataacc
tatgttcgtgagaaggtcatcgacttttcaaagccgtttatgacacttggaataagtatt
ttgtaccgcaagcccaatggtacaaacccaggcgtcttctccttcctgaatcctctctcc
cctgatatctggatgtatgttctgctggcttgcttgggtgtcagttgtgtgctctttgtc
atagccaggtttagtccctatgagtggtataacccacacccttgcaaccctgactcagac
gtggtggaaaacaattttaccttgctaaatagtttctggtttggagttggagctctcatg
cggcaaggttctgagctcatgcccaaagcactctccaccaggatagtgggaggcatttgg
tggtttttcacacttatcatcatttcttcgtataccgctaacctagccgcctttctgact
gtggaacgcatggagtcgcccattgactctgctgacgatttagctaagcaaaccaagata
gagtatggagcagtggaggacggcgcaaccatgacgttttttaagaaatcaaaaatttca
acgtatgataaaatgtgggcgtttatgagcagcaggagacagtctgtgcttgtcaaaagc
aatgaggaagggatccaacgagtcctcacctcggattatgctttcttaatggagtcaaca
accatcgagtttgttacacagcggaactgtaacctcacgcagattggcggccttatagac
tccaaaggctatggcgttggcactcctatgggctctccatatcgagacaaaatcaccata
gcaattcttcagctgcaggaggaaggcaagctgcacatgatgaaggagaaatggtggcgg
ggcaatggctgcccagaggaggagagcaaagaggccagtgctctgggggtgcagaatatt
ggtggtatcttcattgtcctggcagccggcttggtgctctcagtttttgtggcagtggga
gagtttttatacaaatccaaaaaaaacgctcaattggaaaagaggtccttctgtagcgct
atggtggaagagctgagaatgtccctgaagtgccagcgtcggctcaaacataagccacag
gccccagttattgtgaaaacagaagaagttatcaacatgcacacatttaacgacagaagg
ttgccaggtaaagaaaccatggcatga
DBGET
integrated database retrieval system
