Rattus norvegicus (rat): 685612
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Entry
685612 CDS
T01003
Symbol
Col26a1
Name
(RefSeq) collagen alpha-1(XXVI) chain precursor
KO
K24358
collagen type XXVI alpha (EMI domain-containing protein 2)
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
685612 (Col26a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
685612 (Col26a1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
685612 (Col26a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
Collagen
Motif
Other DBs
NCBI-GeneID:
685612
NCBI-ProteinID:
NP_001258197
RGD:
1591401
Ensembl:
ENSRNOG00000001422
UniProt:
A6J068
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All DBs
Position
12:25429362..25575205
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AA seq
438 aa
AA seq
DB search
MKLVLLLPWACCCLCGSALATGFLYPFPAAALQQHGYPEQGAASPGNGYSSRRHWCHHTV
TRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVRTLIRPTYRVSYRTVTALEWRCCPGFT
GSNCEEECMNCTRLSDMSERLTTLEAKVLLLEAAEQPAGPDNDLPPPQSTPPTWNEDFLP
DAIPIAHPGPRRRRPTGPAGPPGQMGPPGPAGPPGSKGDQGQTGETGPVGPPGLLGPPGP
RGLPGEMGRPGPPGPPGPAGSPGLLPNSPQGVLYSLQTPTDKENGDSQLNPAVVDTVLTG
IPGPRGPPGPPGPPGPHGPPGPPGAPGSQGMVDEQVVAKPSGEPSVKGEEDKATTTEGEG
VQQLREALKILAERVLILEHMIGVHDPLASPEGGSGQDAALRANLKMKRGGPRPDGILAA
LLGPDPAQKSPDQAGDRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggttttgctgttaccatgggcgtgctgctgcttgtgcggttcagcgctggcc
accggcttcctctacccattcccggcagcagccttgcagcagcacggctacccggagcag
ggcgccgcctcccccggcaacggctactcgagtcgccggcactggtgccatcacacggtg
acaaggacagtgtcctgccaggtgcagaacggctccgagacggtggtccaacgagtctac
cagagttgccggtggcctgggccctgtgccaacctcgtgaggactctcattagaccgacc
taccgggtttcttaccgcaccgtgactgcgctggagtggaggtgttgccctggatttact
ggaagcaactgtgaggaggaatgtatgaactgtacccggcttagcgacatgagtgagcgg
ctgaccacgctggaagccaaggttctcctgctggaggcagccgagcagcctgcaggtcca
gacaatgacctgccacccccgcagagcaccccaccaacctggaacgaggacttcctgcca
gatgccattcctattgcccatccagggccccggaggagaagacccacaggtccagctgga
cctccaggacagatgggaccacctgggcctgcagggcctccaggttccaaaggtgaccag
ggccagacaggagagacaggcccagtgggacctccaggtctcctgggaccaccagggcca
cgcgggcttcctggagagatgggacgccctggtccaccaggccctcctggcccagcaggc
agtcctggcctcttgccaaacagtccccaaggcgtcctctactccctgcagacacctaca
gacaaggagaatggagactcccagctcaaccctgctgttgtagacacagtgctgactggc
atcccaggtccccggggtcccccgggaccccctggtcccccaggaccacatggtccacca
ggacccccaggagcacctggatcccagggtatggtggatgagcaggttgtggcaaagcca
tctggtgaacccagtgtgaagggagaagaggacaaagccaccaccacagagggagaaggc
gtgcagcagcttcgagaggccctgaagatcctggcagagagggtccttatcctggaacac
atgattggggtccatgatcccctggcctcccctgaggggggctctgggcaggatgcggcc
ctgagagccaacctcaagatgaagcgaggaggtcctcgacctgatggcatcctggctgcc
ctgctgggccctgaccctgcacagaagagcccagaccaggctggagacaggaagtaa
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