KEGG   Rhodococcus opacus PD630: Pd630_LPD00380
Entry
Pd630_LPD00380    CDS       T03071                                 

Definition
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pd630_LPD00380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD00380
Enzymes [BR:roa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Pd630_LPD00380
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pd630_LPD00380
SSDB
Motif
Pfam: UDG PRAP
Other DBs
NCBI-ProteinID: AHK27624
UniProt: W8GY48
LinkDB
Position
375248..375898
AA seq 216 aa
MSRATKPSAAPFVPDTVDLDALSHAADGCHGCDLYRDAEQTVFGAGKRSARMMLVGEQPG
DQEDRAGEPFVGPAGKLLNKALDAAGIDRNVTYVTNAVKHFKFVPAERGKRRIHKKPNRT
EIVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEHRGELLHLDGEVDVDVEPD
VFATIHPSAVLRGPTEDRDDAFDALVADLKKAAAAL
NT seq 651 nt   +upstreamnt  +downstreamnt
atgtcacgagccacgaagccctcggccgcaccgttcgtgccggacaccgtcgacctcgac
gcgttgtcccacgccgcggacggatgccacggctgcgatctgtaccgcgacgccgagcag
accgtgttcggcgcgggcaagcgatccgcgcggatgatgctcgtcggcgaacagccgggc
gatcaggaagaccgcgccggtgagccgttcgtcggtccggcgggaaagctcctgaacaag
gcgctcgacgcggcgggcatcgaccggaacgttacgtacgtcaccaacgccgtcaaacac
ttcaagttcgtccccgccgaacgcggcaagcgccgaatccacaagaagccgaaccgcacc
gagatcgtcgcgtgccggccgtggctgatcgccgaactggcggccgtgcaacccgacgtc
ctcgtgtgcctcggggccaccgccgcgcaggcgttgctcggcccgtcgttccgcctcacc
gaacaccgcggagagttactgcatctcgacggcgaggtggacgtcgacgtggagccggac
gttttcgcgacgatccacccgtccgccgtgctccgcggaccgacggaggatcgggacgac
gcgttcgacgccctcgtcgccgatctgaagaaggccgccgccgccctgtga

KEGG   Rhodococcus opacus PD630: Pd630_LPD02574
Entry
Pd630_LPD02574    CDS       T03071                                 

Definition
(GenBank) Uncharacterized protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pd630_LPD02574
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD02574
Enzymes [BR:roa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Pd630_LPD02574
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pd630_LPD02574
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AHK29797
LinkDB
Position
complement(2719285..2719749)
AA seq 154 aa
MGAALTDIAGLDAQLIECRACPRLVEWREKVAREKRASFRDETYWGRPVPGFGPPDASLL
IVGLAPAAHGANRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGVRITSPV
HCAPPATSPPRTNATTAATGSTPNCASCNPTCGR
NT seq 465 nt   +upstreamnt  +downstreamnt
gtgggcgcggcgctgaccgacatcgccggtctcgacgcccagctgatcgaatgccgagcc
tgcccccgcctcgtcgagtggcgggagaaggtcgcgcgtgagaagcgcgcgtcgttccgt
gacgaaacctattggggtcgaccggttcccggattcggcccacccgatgcgtcgctgctg
atcgtcggtctcgcccccgccgcccacggtgcgaaccggaccgggcgcatgttcaccggc
gaccgcagcggcgacttcctctacgccgcactccacgctgtgggactcgcgagccagccg
accgccacccacatcggcgacggcctcgaactgttcggcgtccgcatcacgtccccggtg
cactgcgcgccgcccgcgacaagcccaccccggacgaacgcgacaactgccgccactggc
tcgacgccgaactgcgcatcctgcaaccccacctgcggtcggtga

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