Rhodococcus opacus PD630: Pd630_LPD00801
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Entry
Pd630_LPD00801 CDS
T03071
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03030
DNA replication
roa03430
Mismatch repair
roa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pd630_LPD00801
03430 Mismatch repair
Pd630_LPD00801
03440 Homologous recombination
Pd630_LPD00801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roa03032
]
Pd630_LPD00801
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD00801
Enzymes [BR:
roa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pd630_LPD00801
DNA replication proteins [BR:
roa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pd630_LPD00801
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pd630_LPD00801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
DNApol3-delta_C
Mg_chelatase
RuvB_N
AAA_5
DUF2914
DNA_pol3_delta
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHK28039
LinkDB
All DBs
Position
814215..815429
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AA seq
404 aa
AA seq
DB search
MTVFDRLVGQEDVEVELTAAATAARRGVGAMGSTMTHSWLFTGPPGSGRSVAAQCFAAAL
QCTSDGVPGCGVCHACTTAMAGTHGDVRQVVPEGLSISVKEMRAIVQTAARRPSTGRWQI
VVVEDADRLTEGAANALLKVVEEPPDRTVFLLCAPSVDPQDISVTLRSRCRHVHLVTPSA
DSIAKVLRERDGLDPADAQLAASISGGHVGRARRLATDLNAKVRRKDALDLAVAALRPAT
AFAAAEELVRSADAEAKEMSAARDEQETEELRTALGAGGTGKGAAGALRGSAGVLKDLEK
RQKSRATRTGRDALDRALIDLAGLYRDALAVAWKSNAAANHPDMADRAADLASRTTPEGL
LKCIEAVLECREAITVNVKPQWAVDAMVATLGDAFREPFSHTRG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtattcgaccggttggtgggccaggaggacgtcgaggtcgagctgacggccgcg
gcgactgccgcccgtcgtggagtcggtgcgatgggctccacgatgacgcattcatggctc
ttcactggcccaccgggatcgggtcgatcggtggcggcgcagtgtttcgccgccgcactc
caatgcaccagcgacggcgttcccggctgcggcgtgtgccacgcctgcaccaccgcgatg
gccggtacccacggtgacgtccggcaggtcgtccccgagggcctgagcatcagcgtcaag
gaaatgcgcgccatcgtgcagacggcggcccgccggccgagcaccgggcgctggcagatc
gtggtcgtcgaggacgcggaccggctcaccgagggtgcggccaacgctctcctgaaagtg
gtggaggagccgccggaccgcaccgtgttcctgttgtgtgcgccctccgtcgacccgcag
gacatctccgtgacgctgcggtcgcgctgccggcacgtccatctcgtgaccccgtcggcc
gactccatcgccaaggtcctgcgcgagcgggacggcctggaccccgccgatgcgcaactg
gcggcctcgatcagcggcggtcacgtcgggcgagcccggcgtctggcgacggatctgaac
gccaaggtgcgtcgcaaggacgctctggatctcgctgtcgcggcactgcggcccgccacc
gcgttcgccgcggcggaggaactggtgcgttccgccgacgcggaggcgaaggaaatgagc
gcggccagggacgagcaggagaccgaggagttgcgcacggctctgggggcgggcggcact
ggtaagggagcggccggggccctccgaggctcggccggcgtgctgaaggatctcgagaag
cgccagaagtcccgggccactcgcacgggccgtgacgcactcgaccgtgcactgatcgat
ctggctggtctctaccgcgacgcgctcgccgtcgcatggaaatcgaacgcggccgcgaac
cacccggacatggcggatcgcgcggccgacctcgcctcgcgaacaaccccggaaggcctt
ctgaagtgcatcgaagccgtcctcgagtgccgagaggcgatcaccgtcaacgtcaagccg
cagtgggctgtcgatgccatggtggccactctcggcgacgcgttcagggagccgttttcg
catactcggggttga
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