Rhodococcus opacus PD630: Pd630_LPD01519
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Entry
Pd630_LPD01519 CDS
T03071
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD01519
Enzymes [BR:
roa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pd630_LPD01519
DNA repair and recombination proteins [BR:
roa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pd630_LPD01519
Prokaryotic type
Pd630_LPD01519
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHK28748
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All DBs
Position
1548162..1549502
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AA seq
446 aa
AA seq
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MDTALVWFRRDLRLGDLPTLHTVAESGARALGLFVLDDRLLTTSGGARRDFLFRSLAALD
DRLDGRLLVVKGDPVDVVPRVAEKVSAEEVHVSADYGPYGRERDAAVAEHVELVATGSPY
AVAPGRVTKTDGEPYRVFTPYFRQWLEHGWRAPIDTGPATVEWVDPDDVKARRVQIPEPE
SDGYAAGEAAALQRWAEFCEDDLAGYEDARDRPGLDATSRMSVYLKYGNIHPRTMLRDLA
RRRSKSAEQYRRQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGPDAEEAFTAWCEG
RTGFPIVDAGMRQLKAEAWMHNRVRMIVASFFVKDLHLPWWRGARYFMNQLVDGDLANNQ
HGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGISGKAVHALKDGRPE
DYPPPIVDHAHERQEALARYGEIKAP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcactcgtctggttccggcgcgacctccggctcggtgatctgccgacgctc
cacacggtggccgagtcgggggcgcgtgcgctcgggttgttcgtcctcgacgatcggctg
ctgacaacatcgggcggtgcgcgccgggacttcctgttccgcagtctcgccgcgttggac
gaccgactcgacggccggttgctggtggtgaagggcgatcccgtcgacgtggtcccgagg
gtggcggagaaggtgtcggccgaagaggtgcatgtcagcgccgactacgggccgtacggt
cgcgagcgtgacgccgcggtcgccgagcacgtcgaactcgtggccaccgggtcgccctac
gcggtggcaccgggccgggtgaccaagacggacggggagccgtaccgcgtgttcaccccg
tacttccggcagtggctcgaacacgggtggcgcgccccgatcgacaccggtccggcgacg
gtggagtgggtggacccggacgacgtgaaggcgcggcgggtgcagatccccgaacccgaa
tccgacgggtacgccgcgggtgaggcggcggcgctgcagcggtgggcggagttctgcgag
gacgacctcgccgggtacgaggacgcgcgcgatcgtcccggtctcgacgcgaccagccgg
atgtcggtgtacctgaagtacggcaacattcatccgcgcacgatgctccgcgatctcgcg
cgccgccgcagcaagagcgccgaacagtaccggcggcagctcgcgtggcgggacttctac
gccgacatactcttccagcgccccgacagcgcccgcggaaactacgaccgtcgcttcgac
cacatccgctacgacagtgggcccgacgccgaggaggcgttcacggcgtggtgcgagggc
cggaccgggttcccgatcgtcgacgccgggatgcgtcagctgaaagccgaagcctggatg
cacaatcgggtgcggatgatcgtcgcgtcgttcttcgtcaaggatctgcacctgccgtgg
tggcggggtgcccgctacttcatgaaccagctcgtcgacggcgatctggcgaacaatcag
cacggctggcagtggaccgcgggatcggggacggacgcgtcgccgtacttccgggtgttc
aacccgacgacgcagggggagaagttcgaccccgacggcgagtacgtgcggcggtgggtg
cccgaactgcgtggcatctccgggaaggccgttcacgccctgaaagacggtcgccccgag
gactatccgccgccgatcgtcgaccacgcccacgaacggcaggaggcgctcgcccgctac
ggcgagatcaaggccccgtga
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