KEGG   Rhodococcus opacus PD630: Pd630_LPD01623
Entry
Pd630_LPD01623    CDS       T03071                                 

Definition
(GenBank) DNA polymerase III polC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03030  DNA replication
roa03430  Mismatch repair
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pd630_LPD01623
   03430 Mismatch repair
    Pd630_LPD01623
   03440 Homologous recombination
    Pd630_LPD01623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:roa03032]
    Pd630_LPD01623
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD01623
Enzymes [BR:roa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pd630_LPD01623
DNA replication proteins [BR:roa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pd630_LPD01623
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pd630_LPD01623
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AHK28852
LinkDB
Position
complement(1710286..1710981)
AA seq 231 aa
MTSWSDRPICAFDLETTGPDPTDARIVSACIAVVDAHHFESRTWLLDPEVPIPQGASDVH
GISTEYARSHGQDYATGYGEIREALHDAWTRDHAVVAFNASYDLTVMHTEGLRLGLTELV
TGIVVDPYVIDREMDRYRKGRRTLGAVCEHYGIALEDAHEAEADAIAAAHLARTLAQEYP
NLRALDIMSHQAGWHAERQRDFADYLVRQGRDASDVNGEWPIRGLPRFRIA
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaccagctggtcggacagaccgatctgcgcgttcgacctggagacgacgggacccgac
cccaccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacttcgag
tcgcgaacctggctgctcgacccggaggttcccatcccgcagggcgcctcggacgtgcac
ggaatctccacggagtacgcccggtcccacggacaggactacgccaccgggtacggcgag
atccgcgaggctctgcacgacgcgtggacccgcgaccatgccgtcgtcgcgttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggcctgcgcctcgggctgaccgaactcgtc
accggcatcgtggtcgatccctacgtcatcgaccgcgagatggaccggtatcggaagggc
aggcgcactctcggcgcggtgtgcgagcactacggcatcgcgctggaggacgcccacgag
gccgaggccgacgcgatcgccgccgcgcacctcgcccggacgctcgcgcaggagtatccg
aatctgcgggccctggacatcatgagccatcaggccggctggcacgcggaacggcaacgc
gacttcgccgactacctcgtccggcagggccgtgacgcatcggacgtcaacggcgagtgg
ccgattcgcggtctcccccggttccgcatcgcctga

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