Rhodococcus opacus PD630: Pd630_LPD01623
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Entry
Pd630_LPD01623 CDS
T03071
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03030
DNA replication
roa03430
Mismatch repair
roa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pd630_LPD01623
03430 Mismatch repair
Pd630_LPD01623
03440 Homologous recombination
Pd630_LPD01623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roa03032
]
Pd630_LPD01623
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD01623
Enzymes [BR:
roa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pd630_LPD01623
DNA replication proteins [BR:
roa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pd630_LPD01623
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pd630_LPD01623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AHK28852
LinkDB
All DBs
Position
complement(1710286..1710981)
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AA seq
231 aa
AA seq
DB search
MTSWSDRPICAFDLETTGPDPTDARIVSACIAVVDAHHFESRTWLLDPEVPIPQGASDVH
GISTEYARSHGQDYATGYGEIREALHDAWTRDHAVVAFNASYDLTVMHTEGLRLGLTELV
TGIVVDPYVIDREMDRYRKGRRTLGAVCEHYGIALEDAHEAEADAIAAAHLARTLAQEYP
NLRALDIMSHQAGWHAERQRDFADYLVRQGRDASDVNGEWPIRGLPRFRIA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctggtcggacagaccgatctgcgcgttcgacctggagacgacgggacccgac
cccaccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacttcgag
tcgcgaacctggctgctcgacccggaggttcccatcccgcagggcgcctcggacgtgcac
ggaatctccacggagtacgcccggtcccacggacaggactacgccaccgggtacggcgag
atccgcgaggctctgcacgacgcgtggacccgcgaccatgccgtcgtcgcgttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggcctgcgcctcgggctgaccgaactcgtc
accggcatcgtggtcgatccctacgtcatcgaccgcgagatggaccggtatcggaagggc
aggcgcactctcggcgcggtgtgcgagcactacggcatcgcgctggaggacgcccacgag
gccgaggccgacgcgatcgccgccgcgcacctcgcccggacgctcgcgcaggagtatccg
aatctgcgggccctggacatcatgagccatcaggccggctggcacgcggaacggcaacgc
gacttcgccgactacctcgtccggcagggccgtgacgcatcggacgtcaacggcgagtgg
ccgattcgcggtctcccccggttccgcatcgcctga
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