KEGG   Rhodococcus opacus PD630: Pd630_LPD02524
Entry
Pd630_LPD02524    CDS       T03071                                 

Definition
(GenBank) G/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pd630_LPD02524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD02524
Enzymes [BR:roa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     Pd630_LPD02524
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pd630_LPD02524
SSDB
Motif
Pfam: UDG DUF1622
Other DBs
NCBI-ProteinID: AHK29747
LinkDB
Position
2671781..2672350
AA seq 189 aa
MSFTRAELESFRDAEVADLIGPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALLAAGI
IERPIDPTAGMSDADRDHLIERGVGITNLASRATAKADELTGEELAVGAERLRTVVRDTT
PRVVAVAGITAYRTAFGERAARKGKQPRDLEGAELWLVPNPSGLNAHETVATLGASYREA
AIEAGIVSG
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgagcttcactcgtgcggagttggagtcgttccgggacgccgaggttgcggacctcatc
ggaccgggctgccgactgctgttcgtcggtatcaacccgggactgtggacggccgcgacc
ggggcgcatttcgcgcgcccgggcaaccgtttctatccggccctgctggccgcggggatc
atcgagcgtccgatcgatccgacggcagggatgtcggacgcggatcgcgatcacctgatc
gagcggggcgtcggcatcaccaacctggcctcgcgtgccacggcgaaggcggacgagttg
accggtgaggagctggccgtcggcgccgagcgcttgcgcaccgtggtccgcgacaccact
ccccgggtggtcgccgtcgccggaatcaccgcatatcgcacggctttcggggagcgtgcc
gcgaggaagggcaagcagccgcgcgacctcgagggcgcggagttgtggttggtcccgaac
cccagcgggctcaacgcccacgaaaccgtcgccacgctgggcgcgtcgtaccgggaggcg
gcgatcgaggcgggaatcgtatccggctga

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