KEGG   Rhodococcus opacus PD630: Pd630_LPD02804
Entry
Pd630_LPD02804    CDS       T03071                                 

Definition
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Pd630_LPD02804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:roa03021]
    Pd630_LPD02804
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD02804
Enzymes [BR:roa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Pd630_LPD02804
Transcription machinery [BR:roa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Pd630_LPD02804
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Pd630_LPD02804
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: AHK30027
LinkDB
Position
3006845..3007906
AA seq 353 aa
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDAEGTEDYAETEQL
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgacaaccgctcgaag
ttcgtcatcgagcccctcgagccaggcttcgggtacaccctcggcaactcgctccgtcgc
acgctcctttcgtcgattcccggcgctgctgtcaccagcatccgcatcgacggcgttctg
cacgagttcaccacagttcccggtgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgtgactgcaggcgacatcgtgcccccggccggcgtcaccgtgaacaac
ccggatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgttcccgccgtccagaacaaggcgtccggcgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgcgtcgagcagcgcaccgacttcgatcggctcgtgctcgatgtggaaaccaagaac
tccatcaccgctcgggacgcgctcgcttcggcgggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccctcgcccgccgag
gccgatcacattgcttcgttcggactgcccatcgaggacctggacctgacggtccgttcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgatctgctcgacatccgcaacttcggacagaagtccatcgacgaggtgaaggtcaag
ctgcattcgctcggcctggccctcaaggacagccccgcgtccttcgatcccaccaccgtt
gccggctacgacgccgccaccgggacgtggagcgacacggacgcaggttccttcggtgat
gccgagggcaccgaggactacgccgagaccgaacagctgtag

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