KEGG   Rhodococcus opacus PD630: Pd630_LPD03520
Entry
Pd630_LPD03520    CDS       T03071                                 

Definition
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:3.6.4.12]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Pd630_LPD03520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD03520
Enzymes [BR:roa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     Pd630_LPD03520
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Pd630_LPD03520
    RecFOR pathway proteins
     Pd630_LPD03520
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 Sigma54_activat AAA_3 RNA_helicase IstB_IS21 Zeta_toxin Resolvase AAA_14 Sigma54_activ_2 DUF815 Rad17 NTPase_1 TsaE AAA_18
Other DBs
NCBI-ProteinID: AHK30733
LinkDB
Position
3715743..3716840
AA seq 365 aa
MNPEPGGDYDEESQVSADLVAGDGDIEASLRPKNLHDFIGQPRVREQLQLVLTGAKMRGG
TPDHILLSGPPGLGKTSMAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFID
EIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRD
RFGFTAHMDFYEPAELQQILMRSAGILGVQLGEEAGAEIASRSRGTPRIANRLLRRVRDY
AEVRADGVVTREIAHAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEE
PATVEEVCEPFLVRAGMIARTPRGRVATAAAWTQLGLIPPPDAVTGGIEVRVNEPQASLF
DPEDP
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaatcccgaacccggcggcgactacgacgaggagtcccaggtctcggctgatctcgtc
gccggcgacggcgacatcgaggccagcctgcggccgaagaacctccacgacttcatcggg
caaccgcgggtccgggagcagttgcaactcgtcctgaccggcgccaagatgcgcggcggc
acccccgaccacatcctcctctcgggcccgcccgggctggggaagaccagcatggcgatg
atcatcgcggccgaactgggctcctcgctgaggctgacgtcgggtccggcgctggaacgg
gcgggcgatctggccgccatgctgagcaatctcgtcgagggtgacgtgctgttcatcgac
gagatccaccgcatcgcgcggcctgccgaagagatgctctacctcgcgatggaggacttc
cgggtcgacgtcgtggtcggcaaagggcccggcgccacctcaatccccctcgaggtcgcg
ccgttcaccctggtcggggccaccacgcgctccggggcactcaccggaccgctgcgcgac
cggttcggcttcactgcccacatggacttctacgaacccgcggagctgcagcagatcctc
atgcgatcggcgggcattctcggagtgcaactcggcgaggaggccggcgccgagatcgcg
agccggtcccggggcacgccccgcatcgccaaccgccttctccgtcgcgttcgcgactac
gccgaggtccgggcggacggcgtcgtcacccgcgagatcgcccatgcggccctcgccgtc
tacgacgtcgaccaactgggactcgaccgtctcgaccggtccgttctcagtgccctcgtg
cgcagcttcggcggcggcccggtcggggtgtccaccctggccgtcgcggtcggtgaggag
cccgccaccgtcgaggaggtgtgtgagcccttcctcgtccgcgccggaatgatcgcccgg
acaccccgcggccgtgtcgccacggccgccgcgtggacgcaactgggcctgatcccgccg
cccgacgctgtgaccggcggaatcgaggtccgcgtcaacgagccgcaggcctccctgttc
gatccggaagacccctga

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