KEGG   Rhodococcus opacus PD630: Pd630_LPD05998
Entry
Pd630_LPD05998    CDS       T03071                                 

Definition
(GenBank) Tellurium resistance protein TerD
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03030  DNA replication
roa03430  Mismatch repair
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pd630_LPD05998
   03430 Mismatch repair
    Pd630_LPD05998
   03440 Homologous recombination
    Pd630_LPD05998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:roa03032]
    Pd630_LPD05998
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD05998
Enzymes [BR:roa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pd630_LPD05998
DNA replication proteins [BR:roa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pd630_LPD05998
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pd630_LPD05998
SSDB
Motif
Pfam: TerD RNase_T BRCT PTCB-BRCT DNA_pol_A_exo1 PGM_PMM_I
Other DBs
NCBI-ProteinID: AHK33189
LinkDB
Position
complement(6218925..6220655)
AA seq 576 aa
MDVETSGLRSSTHRVLSVAALALREDGSVERELVTLLNPGCDPGPVHIHNLTPQRLAGAP
RFEDVAKDLLELLDGRTLVAHNASFDYGFLDAEARRAGMTMPTRQRLCTLALSRRLEIDV
PNHKLSTLAAHWKVRQHRAHDAYDDALVLTEVFAHSASLAESLRLPLPVVGCADRRAVYP
DRVPRVESPWRNPGRLDPGAGLVQGMKLVISGSTDVPRLALAARLTAAGLDVMNSVSRQT
SVVVCNDPHSSSAKVRRAVADGIPVLTERQLGEMLLHVTPGEPKGAAAPSEVQRPRPATT
VPSTKPWHGRRVLIVGGSHADSVLMRSRIVQLGAKPSVNLSAGVTDVLVLDGGELDPRMD
RVSARQLPLLTAPDVNSALEPAAPPERGALREPIRPPSQWVAPLLARGEVIDLPPQTTSL
TVNASWRAHTEDDAFDVDVVALLLGEDGRVGCDEDFLFYNSPTSSDGTVELSCDGSSEQG
VRIELAALHSDYQCVSVSAAIGGDRAFGELGPISVTVDAPDRTIASFVLDAGTTERTMHF
AEIYRRAGQWRLRAVGQGYEYDLATLATEYGVTVDD
NT seq 1731 nt   +upstreamnt  +downstreamnt
gtggacgtcgagacctccggtcttcgttcgtccacgcacagagtgctcagcgtcgcggcg
ttggcgttgcgtgaagacggttcggtggagcgtgaattggtgactctgctcaacccgggc
tgcgacccggggccggtccatatccacaatctcacgccacagcgtctggcgggggcgccc
cgtttcgaagacgtcgcgaaagatctgctcgagcttctcgacggtcggacgctggtcgcg
cacaacgcgtcattcgattacggcttcctcgacgccgaggcacggcgggcggggatgacg
atgccgacacggcagaggctctgcaccctcgccctgtcgcgccgcctcgagatcgacgtc
cccaatcacaagttgtccactctggccgcgcactggaaggttcgtcagcaccgggctcac
gacgcttacgacgacgccctcgtgctgacggaggtcttcgcgcacagcgcctcgctggcc
gagtctctcagacttcctctgccggtcgtcggttgcgccgatcggcgggcggtgtacccc
gatcgggttccgcgcgtggagtctccgtggcggaatccgggtcggctggatccgggggcg
ggactggtccagggcatgaaactggtcatcagcggcagtacggatgttccccgtcttgcg
ctcgccgcacggttgaccgccgccggcctggacgtcatgaattcggtcagccgtcagacg
agtgtcgtcgtctgcaacgacccgcactcgtcgagtgcaaaggtgcgccgcgcggtggcc
gacgggattcctgtcctgaccgagcggcagctcggcgagatgttgctgcacgtgacaccg
ggtgagccgaagggggccgcggcaccgtccgaagttcagcggcctcgacctgcgacaact
gttccctccacgaagccttggcacggaagaagggtgctcatcgtcggtggctcgcatgcg
gactccgttctgatgcgctcccgcatcgtgcagctgggtgccaagccgtcggtcaatctc
tccgcaggagtcaccgatgtcctcgttctcgacggtggtgaactcgatccccgcatggac
cgagtgtcggcccgtcagttgcctctgctcaccgcccccgatgtgaactccgcactcgaa
ccggcggcaccacccgagcggggggcgctccgcgagccgatccgaccgccttctcagtgg
gttgcgccgttgctcgctcgcggtgaggtgatcgacctgccaccacagacgacatcgctg
acggtcaacgcgtcttggcgcgcccacaccgaggacgatgcgttcgacgtggatgtggtt
gcgcttcttctcggcgaagacggccgggtcggttgcgacgaggacttcctcttctacaac
tcgccgacgagttcggacggcaccgtggaattgtcctgcgacggcagcagcgagcaagga
gtgcggatcgaactggctgccctgcactccgactaccagtgcgtgtccgtatcggcggcg
atcggcggagatcgcgccttcggtgaactcggtccgatctcggtgaccgtcgacgctccg
gaccgcacgatcgcatcgttcgttctggacgccggcacgaccgaacggacgatgcatttc
gccgagatctaccgacgcgccgggcagtggcgtctccgcgcggtggggcaggggtacgaa
tacgatctcgccacgctcgccaccgagtacggggtgacggtcgacgattga

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