KEGG   Rhodococcus opacus PD630: Pd630_LPD06004
Entry
Pd630_LPD06004    CDS       T03071                                 

Definition
(GenBank) Exodeoxyribonuclease V gamma chain
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Pd630_LPD06004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD06004
Enzymes [BR:roa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Pd630_LPD06004
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Pd630_LPD06004
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AHK33195
LinkDB
Position
complement(6228373..6231633)
AA seq 1086 aa
MLVLHRAERSTTLASALGDVLATPLPDPFAREVVAVPAKGVERWLTQRLSTALGARPDVG
DGVAANIDFPSPTRLVDECLAAATGVTADDDPWNPSRVLWSLLGVVDDCLGEPWCAVLAK
HLGHGLPDRDPDDHRPGRRYATASHLTDLFRSYAAQRPAMLVDWAGGRDTDGAGGPLDDD
LLWQAELWRRLRERIGSPAPAERLDSDCARLREEPDLVELPVRLSLFGPTRLATEQIAVL
AALAVNRDVHLWLPHPSPAMWSSLSAAGSVLARADDDTALSVAHPLLSSLARDVRELESR
LTRLDVDDLHHEGPPPRDSLLGCLQADVRDDRAPALAECTADASVQVHACHGPARQVEVL
RECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFGQDVLGHPGHRLRVRLADRALHQ
TNPVLAVVSALLELADARVTASQVLDLSAAAPVRRRFRFGDDDLERIREWATATGARWGI
GPRQRAAFGLGEFPQNTFTTALDRILLGAAADESEGEWLALALPLDDVDSNDIDLTGRLA
EFVDRLDVALRGLGGPQSVADWSSALTRALDLLVDVSAADTWQLAQARRELGAAMEHGGD
AVLRLSDVRAMLATRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLGLDDEVFPRGV
SVDGDDVLARNPLLGERDPRSEDRQLLLDAVMSASEKLLLFYTGADPVTGMSRPPAIPLS
ELLDAVAATVGSDALPRIVTRHPLQPFDARNFRPGHPFSFDRAALAGARAAQHPPEPEPA
FLPAPLVPPPLGDVDLADLIAFLVHPTQAFLRQRLGLRVPDVDEDLADALDVAPDPLARW
DLGQRMLVARLAGVELADFRAAEWRRGTLPPFKLGESVLGGIEHAVESLVAVSGSVHVGR
AETVDVDVDLGSGRRLTGTVGGVHGSVIASTTYSKLGPKHRLAAWAQLLAVAASDNETEW
TAVTTGRGAYSRPAWRSTLTAPENAAEELVRLVELRDLGLHAPLPIATGASAAYAERRHG
GSSMEDAIEAARKEWSSDFGDSRDRHITYVYGSSPGIDVLGDTVTIENYARQLWAPLLAA
ETVAQP
NT seq 3261 nt   +upstreamnt  +downstreamnt
gtgctcgtactgcatcgcgccgagcgttccaccactctcgcgtcggctctcggcgacgtg
ctcgcgaccccgctgcccgatccgttcgcccgggaggtcgtcgcggtcccggcgaagggg
gtggagcgctggctcacgcagcgactctcgaccgcgctcggtgcccgacccgatgtcggg
gacggggtggccgcgaacatcgacttcccgtccccgacccggctcgtcgacgaatgcctc
gccgccgccacgggggtaaccgccgacgacgacccgtggaatccgtcccgcgtgttgtgg
tcgttgctcggcgtcgtcgacgactgtctcggtgagccctggtgtgccgtcctcgcgaaa
cacctcgggcacggcctcccggaccgcgacccggacgatcaccggcccggccggcgctac
gccaccgcctcacacctgaccgatctgttccgcagttacgccgcacagcggccggcgatg
ctggtcgactgggccggaggtcgcgacaccgacggcgcgggtggtccactcgacgacgac
cttctctggcaggccgaactgtggcggcggctgcgtgagcggatcggcagccccgctccc
gccgagcggctcgactccgactgcgcccggctgcgcgaggaaccggacctcgtcgaactc
cccgtccgactgtcgctgttcggcccgacacggctcgcgaccgaacagatcgccgtcctc
gccgccctcgccgtcaatcgtgatgtgcacctgtggcttccgcatccgagtcccgcgatg
tggtcgtcgctgtccgcggcaggcagcgttctcgcacgcgccgacgacgacaccgcgctg
tccgtcgcccatccgctactgtcgagcctcgcgcgggacgtccgcgaactcgagtcgagg
ctgacccgcctcgacgtcgacgacctccaccacgaggggcctccgccgcgcgactccctg
ctggggtgcctgcaggcggacgtccgggacgaccgggcgcccgcgctcgccgagtgcacg
gccgacgcgtccgtccaggtgcacgcgtgccacggaccggcccgccaggtggaggtcctg
cgtgaatgcctcctgcatctcttcgaggacgatccgactctcgaaccgcgcgacgtgctc
gtcatgtgccccgacgtcgagtcgtacgccccgctgatccgggccgcgttcgggcaggac
gtgctcgggcatcccggccatcggcttcgggtccggctcgcggatcgtgccctgcaccag
accaatccggttctcgccgtggtgtcggctctcctcgaactcgccgacgcgagggtgacg
gcgagtcaggtcctggacctgtcggcggccgcgccggtgcgtaggcggttccggttcggc
gacgacgacctcgaacggatccgggagtgggcgaccgcgacgggcgcccgctggggaatc
gggccgcggcagcgcgccgcattcggtctcggcgaattcccccagaacacgttcaccacc
gcgctcgaccgcatcctgctcggcgccgcggccgacgagtccgaaggcgaatggctcgcc
ctggcgctgccgctcgacgacgtcgacagcaacgacatcgacctcaccgggcggctggcc
gaattcgtcgaccggctcgacgtcgcgctgcgcgggctcggcgggccgcaatcggtcgcc
gactggtcgagcgcgctcacccgggcgctcgacctcctcgtcgacgtcagcgccgccgac
acgtggcaactcgcgcaggcgcgacgagagctcggggcggcgatggaacacggcggcgac
gcggtcctgcgcctgtcggacgtgcgcgccatgctggccacccggctcgcgggccgtccc
acccgcgcgaacttccgcacgggcgagctgacggtgtgcacgatggtgccgatgcggtcg
gtgccgcaccgtgtggtcgttctcctcggcctcgacgacgaggtcttcccgcggggcgtg
agcgtggacggcgacgacgtgctggcccgtaatccccttctcggtgaacgtgacccgcgc
agcgaggaccggcagttgctgctcgatgccgtgatgtcggcgagtgagaaactcctgctg
ttctacacgggcgccgaccccgtcaccggcatgtcccggccgccggcgatcccgctgtcc
gagctgctcgacgcggtggcggccaccgtcgggagcgatgccctgccccgaatcgtgacc
cggcatccgttgcagccgttcgatgcacgcaacttccggcccgggcacccgttcagtttc
gaccgggcggcgctggccggtgcccgcgccgcgcagcacccgcccgaaccggagcccgcg
ttcctgcctgcgccattggtgccgccgccgctgggggacgtcgatctcgccgacctcatc
gcgttcctggtgcacccgacgcaggcgtttctgcggcaacggctcgggttgcgggtcccc
gacgtggacgaggacctcgccgacgcattggacgtggcgcccgatccgctggcccggtgg
gatctcggccagaggatgctcgtcgcgaggctggcgggagtcgaactggccgacttccgc
gccgcggagtggcgccgagggacgttgccaccgttcaagttgggggagtcggtgctgggg
ggtatcgagcacgcggtcgagtcgctcgtcgccgtcagcgggtccgtgcacgtcgggcgc
gcggagaccgtggacgtcgatgtcgatctcggctccggacggcgcctcaccggcaccgtc
ggcggtgtgcacgggtcggtgatcgcgagcaccacgtactcgaagttggggccgaaacac
cgtctcgccgcctgggcgcagttgctggcggtcgcggcgtccgacaacgagaccgagtgg
actgccgtcacgaccggccgcggcgcgtacagccgtccggcgtggcggtcgaccctcacc
gcacccgagaacgcagcggaggagttggtgcgactcgtcgaactgcgcgatctggggctg
cacgcgccgttgccgatcgccacgggcgcgtcggcggcctatgccgaacgacgccacggc
ggcagcagcatggaggacgcgatcgaggcggcccggaaggaatggagcagtgacttcggt
gactcacgcgaccggcacatcacgtacgtgtacgggtcctcaccaggaatcgacgtcctc
ggcgacacggtgaccatcgagaactacgcccggcaactgtgggcgccgctgctcgccgcc
gagacggtggcgcagccgtga

DBGET integrated database retrieval system