KEGG   Rhodococcus opacus PD630: Pd630_LPD06519
Entry
Pd630_LPD06519    CDS       T03071                                 

Definition
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03030  DNA replication
roa03410  Base excision repair
roa03420  Nucleotide excision repair
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pd630_LPD06519
   03410 Base excision repair
    Pd630_LPD06519
   03420 Nucleotide excision repair
    Pd630_LPD06519
   03440 Homologous recombination
    Pd630_LPD06519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:roa03032]
    Pd630_LPD06519
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD06519
Enzymes [BR:roa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pd630_LPD06519
DNA replication proteins [BR:roa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Pd630_LPD06519
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Pd630_LPD06519
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Pd630_LPD06519
SSDB
Motif
Pfam: DNA_pol_A
Other DBs
NCBI-ProteinID: AHK33705
LinkDB
Position
6747220..6748755
AA seq 511 aa
MLLVPDADGGATTVRTDPAGVPIESPRRHSDVVAAVRDIEATEHPRWVWTSTAAVYPALL
RAGVRVRRCQDLALTHAILSMRDGVPAPPPDEPVDERPGLFEAAPTTDPAQVVADFAEQR
KTIGDDARLDLLVAAESAGALAAAEMSFDGLPFSTRTHRAFLEAALGPRPAGYDLPQRIQ
DVTVEIGSAFGRRINPASHVEVVDAFRREGIELASTRKHLLREVDHPAVPLLLRHRDLSK
LFSTNGWQWLESWVRDDRFRPVYVPGGVVSGRWASRGGGALQIPKPLRSSVIADPGHTFV
IADAGQLEPRILAAMSGDARMVAAAGADDLYAPVAAETFDGDRGKAKVAILGVLYGATAG
EARSLLTLLRTRFPVAVEYVERAARAGERGEVVHSWLGRACPPPSPDFWSHGDAHSRGRF
TRNFVVQATASEWALCVLADLRRRLADDPDSELVFFQHDEVMVHTRDPESATRHVLGAVE
VATRLLFGETRVRFPMDVAVRDCYAETSDEA
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtgctcctggttcccgacgccgacggtggcgcgacgaccgttcgcaccgaccccgcgggc
gttccgatcgagtcgccacgtcgtcactccgacgtcgtggccgcggtccgcgacatcgaa
gccaccgaacacccccgctgggtctggacgagcaccgcggccgtctatccggcgctgctg
cgagccggggtgcgggtgcggcgctgccaggacctcgcactcacccacgccatcctcagc
atgcgcgacggtgtacccgcgccaccgccggacgaacccgtcgacgaacgccccggcctg
ttcgaggccgcacccaccacggatccggcgcaggtggtagcggacttcgcggaacagcgg
aagacgatcggtgacgacgcccggctcgaccttctggtggccgccgagtccgcgggagcg
ctggccgccgcggagatgagtttcgacgggctcccgttctccacccgcacccatcgcgcg
ttcctcgaggccgcgctcgggccgcggccggccgggtacgacctgccgcagcgcatccag
gacgtgaccgtggagatcgggtcggcgttcggccgtcgcatcaacccggcatcccacgtg
gaggtcgtcgacgcgtttcgccgggagggcatcgaacttgcgtcgacccgcaaacacctg
ctgcgcgaggtcgatcaccccgccgtgccgctgctcctgcgccaccgggatctgtccaag
ctgttcagcacgaacggctggcagtggctggagagttgggtccgcgacgaccggttccgg
cccgtgtacgttcccggcggcgtggtgtccggccgctgggcgagccgcggcggcggcgca
ctgcagattccgaaaccgctgcggtcgagcgtgatcgccgacccgggtcacacgttcgtc
atcgccgacgccggccaactcgaaccccgcatcctggccgccatgtcgggggacgcccgc
atggtcgccgccgcgggcgccgacgacctgtacgcaccggtcgcggcggagacgttcgac
ggcgatcgaggcaaggccaaggtggcgatcctcggtgtcctgtacggcgccactgcgggc
gaggcccgatccctgctcaccctgctgcgcacccgctttcccgtcgccgtcgaatatgtg
gaaagggcggcccgcgccggtgaacgcggcgaggtcgtgcactcgtggctcggccgggcg
tgcccgccgccgtcccccgacttctggtcgcacggcgacgcgcattcccgcggccggttc
acccgaaacttcgtggtgcaggccacggcatccgagtgggcactgtgcgtgctcgcggac
ctgcggcgccggctggccgacgacccggacagcgagctcgtcttcttccagcacgacgag
gtgatggtccatacccgggaccccgagtcggcgacacggcacgttctgggcgcggtcgag
gtagccacccggttgctgttcggcgagacgcgggtgcggttcccgatggatgtggcggtg
cgggactgctacgccgaaacctccgacgaggcctga

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