Rhodococcus opacus PD630: Pd630_LPD08036
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Entry
Pd630_LPD08036 CDS
T03071
Name
(GenBank) RNA polymerase sigma-H factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD08036
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pd630_LPD08036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
Xre-like-HTH
DUF134
HTH_23
HTH_17
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHK35221
LinkDB
All DBs
Position
8360937..8361518
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AA seq
193 aa
AA seq
DB search
MRIFRGDSEGEPSDVDLLAAHVAGDRHAFETLLGRHYDHLWHVAKRTSYTTEDAADALQE
ALLSAHRNAGSFRRDAAVRSWLHTIVVNACLDRIRRNKARPAVSLSADEDDEPRDTRDYV
SEVELSLVVERALAQLPPDQRTAIVAVDLEGRSTSEAAALLGVPEGTVKSRCARGRKKLA
SSLEYFRVEGNRS
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcttccggggggattccgagggtgagccctcggacgtcgacctgttggctgcg
cacgtcgccggcgatcggcacgcattcgagacactgctcggacggcactacgaccatctc
tggcacgtcgccaaacgcaccagctacaccaccgaggacgcggcggacgccctgcaggag
gcgctgctgtccgcgcatcgcaacgcgggctcgttccgccgggacgccgcggtccggagt
tggctgcacacgatcgtggtcaacgcctgcctcgaccgcatccgccggaacaaggctcgg
ccggcggtgtccctgtccgccgacgaggacgacgaaccgcgcgacacccgcgactacgtt
tccgaggtggagctcagcctggtggtcgagcgcgcactggcgcagctccccccggaccag
cggaccgcgatcgtggctgtcgacctcgagggccgttcgaccagcgaggcggccgcgctt
ctcggggttccggaaggcaccgtcaagagccgctgcgcccgcggccggaagaagctggcc
tcctctctcgaatattttcgggtggaggggaaccgatcatga
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