Rhodococcus opacus PD630: Pd630_LPD14001
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Entry
Pd630_LPD14001 CDS
T03071
Name
(GenBank) Putative HTH-type transcriptional regulator
Organism
roa
Rhodococcus opacus PD630
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_22
TPR_12
NB-ARC
TPR_MalT
AAA_16
HTH_23
AAA_25
nSTAND3
NACHT
Cohesin_load
MYO10_CC
AAT
SNAP
Motif
Other DBs
NCBI-ProteinID:
AHK35868
LinkDB
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Position
p6:85..2379
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AA seq
764 aa
AA seq
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MGNLPVELTSFVGRRRELTETKKMLSDSRLVTLTGIGGVGKTRLALRVAAEVRRGFADGV
WLVELGGLSDGSLLPDAVAAALGLRDQSVRPAREIVLEHVAPRHLLLILDNCEQVVDAVA
VLAEALLRACPDLRVLATSRERLAVGGEVALRVPPLGVPDPDREPDLQALPQYDAVTLFV
ERAAAAVPAFALTPDNRVTVIRICQQLDGLPLPIELAAARLRAMSAAQILDHLTDRYRLL
SLGARGAPSRQQTLRLCMDWSHGLCTPSEQQAWARLSVFAGGFELDAAEGIYSGDLTADD
LLDVVASLVDKSILIREEPGAVVRYRLLETLRDYGREKLQESGDYVSIRRRHRDWYQRLV
FRAEAEWISGRQLEWIARLERERQNLREALEFCVTEPGESGAGLRLAGALYWFWFSRGLL
SEGRRSLDRALSSADGRPTADRVKVVSTASLLAGRQGDFEAAAALIDECREMVEQVDDPH
AYALVAYADGRLALFRGELSRAITHLTKAVRQFHAEGDLLWQISTQGALALAHALHVDTR
RAISYCEEAMAITQSHGEVSYRSYFQWTMALAVWRQGELGRATTLLEEGLHLARLVDDPL
ATAWCLEILAWIAADNKHAQRAGVLLGAADLLRHTVGSPTVMVRNTRTYHEQCEQQVLRA
LGQRAFDAARSHGQSLGTAEAIAYALGEESPIAKRRSDVPSPLTKREQQVADLVAQGLTN
KAIAAHLVISQRTAQGHVEHILTKLGFTSRAQIAAWVVEHEQRS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctgcccgtcgagttgaccagtttcgtcggtcgccgccgggagttgaccgag
acgaagaagatgctgtcggactcacgcctggtgacgttgaccgggatcggtggtgtgggt
aaaacgcgtctcgcgttgcgggtggccgcagaagtacggcgtgggttcgccgacggtgtg
tggctggtcgagctgggcgggctgagcgatgggtcgctcctgcccgatgcggtggctgcc
gccctggggttgcgggaccagtcggtgcggccggcacgggagatagtgctggagcatgtc
gcgccgcgtcacctgctgctcatcctggacaactgtgagcaggtggtggatgcggttgcg
gtcctcgccgaagcactgctgcgggcctgtcccgatctgcgggttctggctaccagccgg
gagaggctggccgtcggcggggaagtggctcttcgggttccgccgctgggggttcctgac
ccggaccgcgagcccgacctccaggctttgccccagtacgatgcggtgacgttgttcgtg
gaacgggctgccgccgctgtcccggcgtttgcgcttaccccggacaaccgggttacggtc
atccggatctgccagcagctcgatggtttgccgctgccgatcgagttggcggcggcgagg
ttgcgggcgatgtccgccgcgcagattctggaccatttgaccgaccggtaccggctgctg
tccttgggcgctcggggtgcaccttcgcggcagcagacgttgcggttgtgtatggactgg
agccacgggctgtgcaccccgagcgaacagcaggcgtgggctcggttgtctgtgtttgcc
ggtggtttcgaactggatgcggcggagggcatctactcaggcgatctgaccgcagacgat
ctgctcgatgtggtggcctcgcttgtcgacaagtcgattctgatccgtgaagaaccgggc
gctgtggtgcggtaccgattgctcgagaccctgcgcgactatggccgggagaagctgcaa
gagtccggtgactacgtgtcaattcgtcgacggcatcgcgattggtaccagcgattggtt
tttcgggcggaagccgagtggatcagtggccggcaactcgagtggatcgcccgcctcgaa
cgggagcgccaaaacctgcgtgaggcactggagttctgcgtgactgagcccggagagtcc
ggggccgggctacgcctcgccggtgcactctattggttctggttctcccgcggcctgctc
agcgaaggcaggcgttctctcgaccgcgcgctgagcagtgcggatggacggccgactgcg
gaccgggtcaaagtcgtgtccaccgccagcttgctcgcgggaaggcagggcgacttcgag
gcagcggcggcgctgatcgacgagtgccgcgagatggtcgagcaggtggatgacccgcat
gcgtatgcgctcgtcgcgtatgccgacgggcgcttagcactcttccgcggcgaactctcc
cgcgcgatcactcacctcacgaaagccgtgcggcagttccacgcagaaggagatctcctg
tggcagatctcaacacagggagcactcgcattggcccacgccctccacgtcgacacccga
cgggccatatcctactgcgaggaggcaatggcgatcacacagtcgcacggcgaggtctcg
taccggtcgtacttccagtggactatggcgctcgcggtgtggcgacagggcgagctggga
cgagcgactaccttactcgaggaaggcctgcacctcgcacgtctcgtggacgacccgctc
gctactgcctggtgcctcgagatactggcctggatcgctgcagacaacaaacacgcccaa
cgcgcgggcgtacttctcggcgccgcggacttactgcgacataccgtcggaagtcccacg
gtcatggttcggaacacgcgcacctaccacgagcagtgcgagcaacaagttctccgcgcg
ctcggccagcgcgccttcgacgccgcacgcagccacggccaaagcttgggcaccgctgaa
gcaatcgcctacgcactcggtgaagaatccccgatcgcgaagcgacgctccgacgtccca
tcgcccctcaccaaacgcgaacaacaggtagcagacctagttgcccagggcctgacgaac
aaggcgatcgccgcccacctggtgatatcgcaacgcaccgcgcaggggcacgtggagcac
atcctcacgaaactcggattcacctcgcgtgcacagatcgctgcctgggtcgtggagcac
gaacagcggtcctga
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