Roseovarius sp. AK1035: RAK1035_0967
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Entry
RAK1035_0967 CDS
T05517
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAK1035_0967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_0967
Transporters [BR:
rok02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RAK1035_0967
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
DUF6520
Motif
Other DBs
NCBI-ProteinID:
AWZ19678
LinkDB
All DBs
Position
complement(962256..963371)
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AA seq
371 aa
AA seq
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MKLTKTLLATTALTVAAGTAVTAQEMANSMTIVSWGGAYQASQDKAYVQPYLAANPGVTA
TWDESSAEAVAKLRAMNEAGNITWDLVDVVASDSMRLCDEGLAMEIDHDTMLAAAPDGTS
ASDDFGDLIVSDCFIPQIVYSTTFGYRTDLVPAGTEPPTSVCDVFDLAKYPGKRSLQKRP
IDNMEWALYCDGVAKDEIYDVLGTDEGVERALAKLGTIKDQVVWWSAGAETPQLLADGEV
FMGSTFNGRLFSAIAEQNQPIAMLWDMQSFDLDGWIVPAGLPADRLARVMDFLKFGTDTQ
RLADQAAYISYGPARASSAPLVGKHAELGIDMAPHMPTDPANASNVHIYDYEWWADNRDD
LDAKFQSWLAQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacgaaaaccctgctcgcgaccacggctctgaccgttgctgcgggcactgcc
gtcaccgcacaggaaatggccaacagcatgacgatcgtcagctggggcggcgcctatcag
gcgagccaagacaaggcttatgtgcagccctaccttgctgctaaccccggcgtgaccgcg
acttgggacgaaagctcggccgaggccgtggccaagctgcgcgccatgaacgaggcaggc
aacatcacttgggatctggtcgatgtggtggcgtccgactcgatgcgcctctgcgacgaa
ggtctggcgatggaaatcgaccacgacaccatgttggccgcggcccccgatggtacctct
gccagcgatgactttggtgatctgattgtcagcgactgcttcattccgcagatcgtttac
tcgaccaccttcggctatcgcactgatcttgtgcctgccggcaccgagccgccgaccagc
gtttgcgacgtgttcgaccttgccaagtatccgggcaagcggtcgctgcaaaagcgcccg
atcgacaacatggaatgggcgctttattgcgacggcgttgccaaggacgagatttacgac
gttctgggcaccgacgagggcgtagagcgcgcgctggccaaactgggcaccatcaaggac
caagtcgtctggtggtctgccggtgcggaaaccccgcagcttctagcggatggcgaagtg
ttcatgggttcgacattcaacggccgtctgttctcggccattgctgaacagaaccagccc
atcgcaatgctgtgggacatgcagtcgtttgaccttgatggctggattgttcccgccggt
ctgcccgcagaccgtctggcgcgcgtgatggacttcctcaagttcggcaccgacacccag
cgtcttgctgatcaggcggcgtatatctcctacggtccggcgcgtgcgtcttcggcaccg
ttggtaggcaagcacgccgagcttggcatcgacatggcgccgcatatgccgaccgatccg
gcaaatgcctccaacgttcacatctatgactacgaatggtgggctgacaaccgtgacgat
ctggacgccaagttccagtcgtggctggcccagtaa
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