KEGG   Roseovarius sp. AK1035: RAK1035_2615
Entry
RAK1035_2615      CDS       T05517                                 
Name
(GenBank) Helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
rok  Roseovarius sp. AK1035
Pathway
rok03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rok00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RAK1035_2615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rok03019]
    RAK1035_2615
   03009 Ribosome biogenesis [BR:rok03009]
    RAK1035_2615
Enzymes [BR:rok01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     RAK1035_2615
Messenger RNA biogenesis [BR:rok03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     RAK1035_2615
Ribosome biogenesis [BR:rok03009]
 Prokaryotic type
  rRNA helicases
   RAK1035_2615
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: AWZ21323
LinkDB
Position
complement(2690219..2692498)
AA seq 759 aa
MILPALSNALAARGYETLTPVQEAVTDPALSGSDLLVSAQTGSGKTVGFGLAIAPTLLGG
EDRLPPAAAPLALIVAPTRELALQVMRELSWLYAEAGARLVTCVGGMDARDERRALERGA
HIVVGTPGRLCDHINRGALDMTSLRAIVLDEADEMLDLGFREDLEFMLAAAPEDRRTLMF
SATVPPMIAKLAEKFQRDAQRVTTLTGAKQHADIAYQALTVSPQDAEGAVINLLRYHDAQ
NAIVFANTRAMVARLTARLSNRGFAVVSLSGELSQSERTHALQAMRDGRARVCVATDVAA
RGIDLPNLDLVVHAELPTNSEGLLHRSGRTGRAGRKGISALIVPLKSANKAERLLKFAKI
TAEWTTPPTPEDIEAKDRERLLSDPVWSETPSETEGAFAAELLALHSPEVIAAAYLRLYK
SRWSAPEELSAPGAPAPARERSAFGPSRWFALSVGNDDRAEARWLLPLLCRAGNLDKSAI
GAIRVQAAETFVELAEAAVPGFLSSLGEGGQLDEGITARALDSAPAFAPAPRAPREDRPE
RAPRAPREDRPARAPREYGGSRDHSAPRTAPKPRPKPAGAPPAAMTRAVEDGTVTPYRKP
RAEAGDAPRPAKKPWSGDKPAGKPANKPFGKPAGDRKPGKSFGKPEGRPYDKSDSKPGAK
PYGKPGAKPSDKPFDKPRARPTPRDAEPAAPRPNLAADTSKRFVPPGAAKKPGKPGTGKT
FAGKPGAGKPAAGKPKGKGAAPKARAGFGGSTPPKRGKP
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgatcctgcctgccctctccaatgctcttgccgcgcgcggctatgaaaccctgacgcct
gtgcaagaggcggtaacggaccccgcgctgtctggctctgatcttctggtctcggcccag
accggatctggtaaaaccgtggggtttggccttgcgatcgcgcccaccctgctggggggt
gaggaccgcttgccgcctgccgccgcaccgctggccctgatcgtggccccaacgcgagag
ctggcgcttcaggtcatgcgcgagctgagctggctttatgccgaagccggtgcgcgtttg
gtcacttgcgttggcgggatggatgcccgtgacgagcggcgcgcgctggagcgcggggcg
catattgttgtcggcacgcccggacgtctgtgtgaccacatcaatcgcggcgcgctcgac
atgacaagcctgcgcgccatcgtgcttgacgaggccgatgagatgctcgatctcggtttt
cgcgaagacctcgaattcatgctggccgcagcgcccgaagatcgccgcacgctgatgttt
tcggccaccgtgccgccgatgatcgccaagctggctgagaaattccagcgcgatgcgcag
cgtgtgaccacgctcaccggcgcgaaacagcatgctgatatcgcctatcaggcgctgact
gtgtcaccgcaagatgccgagggcgccgtgatcaacctgctgcgttatcacgatgcccag
aatgcgattgtgttcgccaatacccgcgccatggtagcccgcctgacggcacgcctgtcc
aatcgcggctttgccgtggtctcgctctcaggtgagttgagccagtccgagcgcacccat
gccctgcaggcgatgcgcgacgggcgggcccgggtctgtgttgccaccgatgtcgccgcg
cggggcatcgacctgcccaaccttgatctggtcgtgcatgccgaactgcccaccaattcc
gaaggcctcttgcaccgctcgggccgaacgggtcgcgccggacgcaagggcatctctgcc
cttatcgttccgctcaaatcggcaaacaaggcagagcgcctgctcaaattcgccaagatc
accgcagaatggaccacgccccccacgcccgaggatatcgaggccaaggatcgcgagcgc
ctgttgtccgacccggtctggtccgaaacgccgtccgagaccgaaggtgcctttgccgct
gaattgctggcgctgcacagccccgaggtgatcgccgccgcctacctgcgtctttacaaa
tcgcgctggtccgcacccgaggaactgagcgcgcccggcgcgccagctccggcgcgcgag
cggtcggcctttggcccaagccgctggtttgcgctgtcggttggcaatgacgaccgggcc
gaggcgcggtggttgctcccgcttttgtgccgtgctggcaatctcgacaaatccgcgatt
ggggccatccgcgtgcaggctgccgaaacctttgtcgaactggcagaggccgccgttccc
ggatttctttcgtcgctcggtgagggcgggcaactggatgagggcatcaccgcccgcgcc
ctggatagtgccccggcgtttgcccctgccccgcgcgccccgcgcgaagatcgtcccgaa
cgtgcgccccgcgccccgcgagaggaccgccctgcgcgcgcgccccgcgagtatggcggc
tcgcgcgaccattctgccccacgcaccgcccccaagccgcgcccgaaaccggcaggtgcg
ccgcccgcggcaatgacccgcgcggtcgaggatggcacggtaaccccgtatcgcaaaccg
cgtgcagaggcgggcgatgcgccgcgcccggccaaaaagccttggtccggtgacaagccc
gctggcaaacctgccaacaagccctttggcaagcccgccggggatcgcaaacccggtaaa
tcctttggcaagcccgaaggtcggccctatgacaagtcggatagcaaacccggcgcaaag
ccctatggcaagccgggggcgaaaccgtcggacaaaccctttgacaagccgcgcgcgcgc
cctacgccccgtgacgcggaaccagccgcgcccagacccaatcttgcggccgatacgtcc
aaacggtttgttccacccggagcggcgaaaaagcccggcaaacccggcacaggcaagacc
tttgctggcaaacccggcgcgggaaagcctgccgctggaaagcccaaaggcaaaggtgct
gcacccaaagcccgcgcgggatttggcggcagcaccccaccgaagcgcggcaagccgtga

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