Roseovarius sp. AK1035: RAK1035_3477
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Entry
RAK1035_3477 CDS
T05517
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAK1035_3477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_3477
Enzymes [BR:
rok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RAK1035_3477
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RAK1035_3477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWZ22184
LinkDB
All DBs
Position
complement(3586894..3587682)
Genome browser
AA seq
262 aa
AA seq
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MSFTLATWNINSVRLREGLVARLMQEEGPDILCLQECKSPVDKMPLEGFAALGYAHVVAR
GQKGYNGVAILSKLPIEEVGAMDFADLGHARHIAGRLENGVVIHNFYVPAGGDVPDRAVN
DKFGQKLDYLTGMRDWFHDSRPEKAILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVDHL
SAVMAAGGWQDVTRADIPEGQLYSWWSYRAADWDAADKGRRLDHVWATGDIATSAHSSRI
LRGARGWEQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttaccctcgccacatggaacatcaattcagtgcgtctgcgtgaaggactggtg
gcgcgcctgatgcaggaagaggggcctgatatcctctgccttcaggaatgcaaaagcccg
gttgataagatgccgctcgagggctttgccgcccttggctatgcccatgtcgtcgcccgt
gggcaaaagggctacaacggagtggcgatcctgtccaaattgcccatcgaagaggtcggg
gcgatggactttgcggatctcggccatgcaaggcacattgcgggccgactggaaaatggt
gttgtgatccacaatttctacgtgcctgcagggggcgatgtgcctgaccgggcggtgaat
gacaaattcggccagaagctcgattatcttacgggcatgcgcgattggttccatgacagc
cgtcccgaaaaggcgatccttgtgggggatctcaacatcgccccgcgcgaggatgatgtt
tggaatcataagcaactgctcaaaatcgtgagccacacccctgttgaagtggatcatctg
agcgcggtgatggcggcgggcggttggcaggatgttacgcgcgccgacattcccgagggg
cagctttatagctggtggtcctatcgcgcagccgattgggacgctgcggataaagggcgc
cggcttgatcatgtctgggccacaggcgacatcgccacttcggcgcattccagccgcatc
ctgcgtggcgcgcggggctgggagcaaccttcggatcacgcgccggtgttcgcaacattt
gatctttga
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