Rhodococcus opacus B4: ROP_11290
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Entry
ROP_11290 CDS
T00882
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rop03019
]
ROP_11290 (orn)
03009 Ribosome biogenesis [BR:
rop03009
]
ROP_11290 (orn)
Messenger RNA biogenesis [BR:
rop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ROP_11290 (orn)
Ribosome biogenesis [BR:
rop03009
]
Eukaryotic type
Pre-60S particles
RNases
ROP_11290 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAH49376
NITE:
ROP_11290
UniProt:
C1AVU6
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All DBs
Position
1183077..1183676
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AA seq
199 aa
AA seq
DB search
MQDKLVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVT
KMHENSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPD
LDTYLHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRKTAFVA
EPGPSTSDIAAVVEELGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaacttgtgtggatcgactgtgaaatgaccgggctccgcctcggcaccgac
aagctgatcgagatcgcggctctggtcacggacagcgagttgaacgtgctcggtgagggt
gtcgacatcgtcatccacgccgacgacgacgcactcgcggcgatgcccgacgtggtgacc
aagatgcatgagaactcggggctgaccgacgaggtccggaaatccacggtcaccctcgcc
gaggccgagcagcaggtgctcgcctacatccgcgagcacgtgcccgtcgcaggcacggcg
ccgctcgccggcaattcgatcgccaccgaccgcgggttcatcgcccgcgacatgccggac
ctcgacacctacctgcactaccgcatgatcgacgtcagctccatcaaggaactgtcccgg
cgctggtacccgcggatctacttcggtcagcccgaaaagggtctcgcccaccgcgccctg
gccgacatcaaggagtcgatccgggagttgaagtactaccggaagacggcgttcgtagcc
gagcccggaccgtctaccagcgacatcgccgcagttgtcgaggaactcgggcccgcctga
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