KEGG   Rahnella sikkimica: BV494_03040
Entry
BV494_03040       CDS       T05331                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
rox  Rahnella sikkimica
Pathway
rox03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BV494_03040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_03040
Enzymes [BR:rox01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     BV494_03040
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BV494_03040
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BV494_03040
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BV494_03040
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AVF33972
UniProt: A0A2L1UM15
LinkDB
Position
complement(688762..690189)
AA seq 475 aa
MSDKPQKTFYFHDYETFGKNPALDRPAQFAGVRTDEDFTIIEEPLVIYCRPSDDYLPEPE
AVMITGITPQIALERGVIEAEFTAQIHKAFSVPGTCIVGYNNIRFDDEVSRNILYRNFYD
PYAYSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGFPSFRLEHLTKANGIEHENAHD
AMADVYATIAMAKLVKQAQPRLFSFLLEHRSKHKLNTLIDIPAMAPLVHVSGMFGAARGN
TAWVAPLAWHPENKNAVIMCDLAGDMSTLLDLDPDQMRERLYSRRDSLQAGESPLPIKLV
HVNKCPVLAPAKTLLPENAERLGIDRQRCLENLQILRQNPQVRGKVVTMYAEAEPFTASE
DVDARLYDGFFSDADRAAMRIILETRPENLPALDLTFNDSRIEPLLFRFRARNYPATLTD
AEQKRWMEHRQTKLTDERVQAYILELESLYNLYEGDAEKIALLGALFEYGKKLVS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcagacaagccgcaaaaaaccttctactttcacgattacgagacattcggtaaaaat
ccggcgctggatcgcccggcgcagtttgccggggtgagaaccgacgaagatttcactatc
atcgaagaaccgttagtgatttattgccgcccttctgatgattacctgccggaaccggaa
gcggtgatgatcaccggtattacacctcaaattgcgctggaacgcggcgtgatcgaagcc
gagtttaccgcgcagatccataaagcatttagcgtgccgggcacctgcattgtcggttac
aacaatatccgtttcgacgacgaagtcagccgcaatatcctttatcgcaacttttacgac
ccttacgcctacagctggcaaaacggcaattcccgctgggatttgctggatgtgatgcgc
gcctgttacgccctgcgcccggaaggcattaactggccggaaaacgacgacggtttcccg
agtttccgccttgaacatctgaccaaagccaacggcatcgaacatgaaaatgcccacgac
gcgatggccgacgtttacgccacgattgccatggcaaaattggtgaagcaggcacaaccg
cgcctgttcagtttccttctcgaacaccgcagcaagcacaaactgaatacgctgattgat
attccggcgatggcaccgctggtccatgtctccggcatgttcggcgcggcgcgcggcaat
accgcgtgggtcgcgccgctggcgtggcatcctgaaaataagaacgcggtgatcatgtgc
gatctggcgggcgatatgtccacgctgttggatctcgacccggatcagatgcgcgagcgt
ttgtacagccgccgcgacagtttgcaggccggggaatctccgctgccgatcaagctggtt
cacgtcaataaatgtccggtgctggcaccggcaaaaacgttgttaccggaaaacgccgag
cgtctgggcattgaccgccagcgttgtctggagaatctccagatattgcggcagaacccg
caggtgcgcggaaaagtggtgacgatgtatgccgaagccgagccgtttaccgcgtccgag
gatgtcgatgcccgcctgtacgacggtttcttcagcgacgccgatcgcgccgcaatgcgg
attatcctggagacacgcccggagaatcttccggcgctggatctgacgtttaatgattca
cgcatcgaaccgctgttgttccggttcagagcccggaattatcctgcgacgctgactgac
gccgagcaaaagcgctggatggagcatcgacagacgaagctcaccgatgagcgtgttcag
gcgtacattttagagcttgaatcgctctataacttgtatgaaggggatgcggagaagatc
gcgttgctcggggcgctgtttgaatacgggaagaaattggtttcctga

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