Rahnella sikkimica: BV494_12220
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Entry
BV494_12220 CDS
T05331
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rox
Rahnella sikkimica
Pathway
rox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BV494_12220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_12220
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BV494_12220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BV494_12220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AVF35645
UniProt:
A0A2L1URR9
LinkDB
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Position
complement(2646485..2647219)
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AA seq
244 aa
AA seq
DB search
MEGWQRAFVLHGRPYSETSLMLDLFTEGQGRVRILAKGARGRRSNLKGCLQPFTPLLVRW
SGRGEVKTLRNAEPVSLALPLSGLMLYSGLYVNELVSRVLEQEANYSALFFDYLNCLQNL
AGATGSPEYALRLFELSLLSHLGYGVDFLHCAGSGEEVSDTMTYRYREEKGFIASLVIDN
SSFTGRDLKALASREFDVVTLRAAKRFTRMALKPYLGGKPLKSRELFRQFQVKKPASSSD
NSAG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcaacgcgcatttgttttgcatgggcgaccttacagtgaaaccagcctg
atgctggatctcttcactgagggacaagggcgggtacgcatactggcgaaaggtgcgcgt
ggccgccggtccaacttaaaaggctgcctgcagccttttacgcctttactggttcgctgg
agcgggcggggagaagtcaaaaccctgcgcaacgccgagccggtttctctggcacttccc
ctttctggtttaatgctctatagcggcctgtacgttaacgagctggtttcccgcgtgctt
gagcaggaagcgaactattctgcgttattcttcgattatctgaattgtttgcaaaatctg
gccggtgcgacaggttcgccggaatatgctttgcgcctctttgaattatcccttttatcc
catctgggctacggcgtggattttctgcattgcgcaggcagcggtgaagaagtcagtgac
accatgacctaccgctaccgtgaagagaaagggtttatcgccagcctcgttatcgataat
tccagttttacaggcagggacttaaaagccctcgccagccgtgaattcgacgtcgtcact
ttacgtgccgccaagcgtttcacccgcatggcgctgaagccgtatctcggcggaaaaccg
ctgaaaagtcgtgagctgttccgccagtttcaggttaaaaagcctgcctcatcgtctgac
aattctgccggttaa
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