Rahnella sikkimica: BV494_14095
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Entry
BV494_14095 CDS
T05331
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
rox
Rahnella sikkimica
Pathway
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_14095
Enzymes [BR:
rox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BV494_14095
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AVF35991
UniProt:
A0A2L1USS1
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All DBs
Position
3064723..3066741
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AA seq
672 aa
AA seq
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MVDSQDASILYLHFGTPRPYWRLGSDSNALELSAEKGIVNVAISLTQWQAGKIRQLTGIT
SSFTLDISLFGSPVRLYLVGRKIDSKAWAGTASAYQDTESVAHDLEVGLTFAEQVVSEAN
SVIVIIDQEGKIHRFNRLSEEYTGLREEDVIGRSAYDLFMSMEEGLASRQNINGFFQHQQ
SYEVERWINTVKGQRLFLFRNKFVHSGSGKQQKYLICSGSDITDERKAQERLRVLANTDL
VTGFANRNALQESLAKALKERGDDKVGLIYLDLDNFKKVNDAYGHMFGDHLLRAVSDAIQ
DCLSPNDKLARLGGDEFIILSTHAEIHTLEELSQRVLRRLGLPFRIGLIEVYTGCSGGIA
ICPEHGTDGDTLLQNADTAMYVAKEKGKNAHCVFSQEMNQKAAEYMWLDTHLRKALAEKD
QLVLHYQPKVSLYGTVQSVEALLRWQSPERGLIQPQSFIPYAEESGLITPIGKWVIETAT
RQATEWQKKGLNLRVAVNLSGRQLNNGSFITTLSDAMKKSGMKGCLLDFELTESCLVEDE
SAAVVMINQLHKLGAQVHLDDFGTGYSSLSQLARIPLDCIKLDQSFIRGINDNPVSQALV
RAIVAVAKTLQLTVVAEGVETPEEEKLVDEIGVDSKQGFLYAKPMPANELEHWLEEKIVA
SPNVFKHKAKQK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactctcaagatgcctccattttgtacctacatttcggtaccccacgcccgtac
tggcggttgggttccgacagcaatgcactggagctatccgctgagaaaggcatcgtcaac
gtagcgatttccctgacgcaatggcaggcagggaaaatcagacaactgaccgggatcacc
tcaagcttcacgctggatatttcgctgttcggatctcccgttcgcctgtatctggtgggc
cgcaaaatcgacagcaaagcctgggcgggtacggcgtcggcttatcaggatactgaatcc
gtcgcacacgatctggaagtcggcctgacgttcgccgagcaggtggtgtctgaagccaat
tcggtcatcgtgatcatcgatcaggaaggcaaaatccaccgttttaaccgcttaagcgaa
gaatacaccggcctgcgcgaagaagacgtcatcgggcgcagcgcctatgatctgtttatg
tcgatggaagaagggctggcgtcgcgccagaacatcaacggcttctttcagcaccagcaa
tcctatgaagtcgaacgttggatcaacacggtgaaaggccagcggttgttcctgttccgc
aacaaatttgttcacagcggcagcggcaagcagcaaaaatatctgatttgctccggctct
gacattaccgatgaacgcaaagcgcaggagcggctgcgcgttctggccaacaccgattta
gtcaccggttttgccaaccgtaacgccttgcaggaatctctcgcgaaagcgctgaaagaa
cgtggtgatgacaaagttggcctgatttatctggatctggataacttcaaaaaggtcaac
gacgcctacggacatatgtttggcgatcacctgctgcgcgcggtatccgatgccattcag
gattgcctgtcgcccaacgataaactcgcgcgattaggcggcgacgaattcattattctc
agcacgcacgctgaaatccacacactggaagaactgagccagcgcgtattgcgccgtctg
ggcttacccttccgcatcggcctgattgaagtctataccggctgttccggcggtattgcg
atatgcccggaacacggcaccgatggcgatacgctgctgcaaaacgccgataccgcgatg
tacgtggcgaaagaaaaaggcaaaaacgcgcactgcgttttctcgcaggaaatgaatcag
aaagccgcggagtacatgtggctggatacgcatttacgcaaagcgctggccgagaaagat
cagctggttttgcactatcagccgaaagtgtctttgtacggcaccgtgcaaagcgtcgaa
gcgttgctgcgctggcaatcgccggagcgcgggctgattcagccgcaaagctttatccct
tacgccgaagagtctggcctgatcacgcctatcggaaaatgggtgattgaaaccgcgacc
cgtcaggcgacggagtggcagaaaaaaggcctgaatctgcgcgttgccgttaacctttcc
gggcggcagctcaacaatggttccttcatcaccacgctgtccgatgcgatgaaaaaatcc
ggaatgaaaggctgtctgctggacttcgagctgacggaaagctgcctggtggaagatgaa
agtgccgccgtcgtgatgattaatcagttacacaaactgggtgcgcaggtgcatctggat
gatttcggtactggttattcgtcgctgtcgcaactggcgcgcattccgctcgactgtatc
aagcttgatcaaagttttattcgcggaatcaatgacaacccggtttctcaggcgctggta
cgggctattgtggcggtggcaaaaaccctgcaactgacggtggtcgcagaaggtgtggaa
accccggaagaagaaaaactggtcgatgaaattggtgtggacagcaaacagggctttctt
tacgccaagccaatgcccgcgaatgaactcgagcactggcttgaggaaaaaatagttgct
tcacccaatgtttttaaacataaagcaaaacagaaatag
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