Rahnella sikkimica: BV494_16660
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Entry
BV494_16660 CDS
T05331
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rox
Rahnella sikkimica
Pathway
rox03030
DNA replication
rox03430
Mismatch repair
rox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BV494_16660
03430 Mismatch repair
BV494_16660
03440 Homologous recombination
BV494_16660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rox03032
]
BV494_16660
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_16660
Enzymes [BR:
rox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BV494_16660
DNA replication proteins [BR:
rox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BV494_16660
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BV494_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AVF36458
UniProt:
A0A2L1UUG2
LinkDB
All DBs
Position
complement(3617814..3618914)
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTDGALSLTGTDLEMEMVAKVALS
QPHEAGATTVPARKFFDICRGLPEGAEISVALDGDRMLVKSGRSRFSLSTLPATDFPNLD
DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPVGQSLPSHSVIVPRKGVMELVRLLDGGDTTLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLQAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVGYEGTEMEIGFNVSYVLDVLNALKCEDVNLLLTDSVSSVQIEDAASQSAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttgaacgtgagcatttgctgaaaccactgcaacaggtcagtagcccg
ctgggtggacgaccgacgttgccaattctgggtaacctgttattacaggtgacggatggc
gcgttgtcgctgaccgggacggatctggaaatggagatggtggcgaaagtcgcgctgtct
cagccacatgaagccggggcgaccaccgttcctgcgcgtaaattctttgatatctgccgg
ggtttgccagaaggcgcggaaatttccgtcgcactcgacggtgaccgcatgctggtaaaa
tcaggccgcagccgtttctcgctgtcgaccctcccggcaacagatttccctaatctcgac
gactggcaaagcgaggtggaattcaccctgccgcaggccacgttgaaacgtctgattgaa
gccacgcagttctcgatggcgcatcaggacgtccgttattatttaaacggcatgctgttt
gaaaccgaaggtgaagaactgcgtaccgtggcgaccgacggtcaccgcctggccgtttgt
tcaatgcctgtgggtcagtcattgccttcgcattcggtgatcgtgccgcgtaaaggcgtg
atggaactggtgcgtttgctcgacggcggcgacaccacgctgcaactgcaaatcggcagc
aacaatatccgtgcgcatgtcggcgacttcattttcacgtccaaactggttgatggccgt
ttccctgattatcgccgcgtattgccgaaaaatccggacaaaacgttgcaggcgggttgc
gacctgctgaaacaggcgtttgcccgtgctgccattctttctaacgaaaaattccgtggt
gtgcgtttgtatgtcagccataaccagctgaaaatcaccgccaataacccggaacaggaa
gaagcagaagaaattctggatgtcggctacgaaggcaccgaaatggaaatcggcttcaac
gtcagttatgtgctggatgtgctgaacgcgctcaagtgcgaagacgtgaatctgctgctc
accgactcggtgtccagcgtgcagatcgaagacgctgcgagccagtcggccgcgtacgtt
gtcatgccgatgaggctctag
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