Rahnella sikkimica: BV494_23540
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Entry
BV494_23540 CDS
T05331
Name
(GenBank) hypothetical protein
Organism
rox
Rahnella sikkimica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
He_PIG
Big_9
Cadherin-like
Cadherin_5
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
AVF37859
UniProt:
A0A2L1UY34
LinkDB
All DBs
Position
unnamed1:461167..464889
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AA seq
1240 aa
AA seq
DB search
MTRLHRATGGCARFVCTFLLLSLVSVSSAIAQSAGCTALDNATFSSATFAAQAYQASQFD
AGDTLTLTFTDSGAGVNSDITNTDSFGLTNYGMSTFTTYYPTAGSGGTAGTHTYTVTGSQ
LVSAGLRFRMTTSHGYLSPLTVSCTSATSASTDASLSTLSASQGSLSPAFSSGTSSYNVV
VANSVTHISLTPTTRNNTATVTVNGVSVTSGSASGSVALSEGNNTLSVVVTAGDGTTTSA
YTVVVQRSGQAPVAGSDSTSVAFNSSNNAITLPLSGGTATSVAVTSPPAHGSVVITGTTA
TYTPVSNYSGADSFSYTASNTWGTSTPATISLTISAPTITLSPATLAAATSGTTYAQTFT
ASGGSGNYSFSISGTLPPGLTFTPGGELSGIPAAAGSYHFTIIAQDTANAASGTQNYTIT
VSGQAPVANAVSTTVTGNSSNNAIVPALSGGAAASVTVATAPLHGTAVASGTSLSYTPVA
GYSGTDTFTYTASNNWGTSAPATVSIHVTNVTLSFTPASGTLSSATVGTPWSQTITASSG
TSPYTYSASGLPTGLTISASTGEISGTPTVSGSYTIQVSAADNAGITGTVSYQLTVAGQA
PVVSAVSSTVAANTRENLIEPMLSGGAVTSLAIVQQPAHGTARIQSLKIRYTPVAGYSGS
DSFIYSASNNFGAAQATVTLNVTATTLAFTPASGALPEGRAGTSYRQTFSTSGGTAPYQF
RISGVLPAGLALAGDTLSGTPAAAGNSNFTLTATDASGVTSQVTYTLNIISAEPVGASHT
ASVLAGKSVRVNLTESATGGPFTGARLVDLPPKTLGNATLGESENNVYLDFDAASQASGT
VALRYVLLTQDSQSAPATVTFTIAGRPDPSKDPDVLGLVSAQIQSAQNFARAQIRNFSDR
LETLHNPASVHSGMNGIRFNMPSSKKERGLDDTLWNSAWENNRQTPELPQLTDKTSAQHP
LNRNNSRINYWTGGFVDFGHSGKDGASFSHTLVGISTGADYQFTPEFTAGMGIGFGRDVS
DIGDSGSRSNGRSVSSAFYGSYHPDNYFIDGLIGYSHLDYDSRRYVTEMDHFARGDRGGY
QVFGAVTTGYDYRLPDLLISPYGRLQLSRTRLNSYTESNADAYDLAFASQVLNDVTGAVG
IRTQYALPLTWSMLRWQSRVEYTHAFSDQGRARLGYADSGNDSWSAEVFGDSQENIVLGM
GLDFLLPHNITPGIAYQGTLGLDAARSRSQMIMVRVNIGF
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccttcatcgcgcaacaggcggctgtgcccgttttgtctgcacttttcttctg
ttgtctttagtttcggtatcatcggccatcgcgcaatccgcaggctgtaccgcactggat
aatgcgacgttctcctccgcgacatttgctgcacaggcttatcaggccagccagtttgat
gccggtgatacgttgaccctgacgtttaccgactccggcgcaggcgtgaacagtgacatc
acgaataccgacagtttcggcctgacgaactacgggatgagcacgttcacaacctattac
cccaccgcaggctccggcggtacggcgggaacacatacttatactgtcacggggtcgcag
ctggtgagtgccggactccggtttcgcatgacgaccagccacggctacctcagcccgctc
acggtttcctgtacctcagcgaccagcgcatcaacagacgccagcctttcgacgctttcg
gcctctcagggttcactgtccccggcgttctcctccggcacctcgtcttacaacgtggtt
gtggccaacagcgtcacccacatttctctgacgccgaccacccgcaataacacggcaacc
gtcactgtgaacggcgtgtccgtcacctcgggcagtgcgtctggttccgttgcactaagc
gaagggaataacacattaagcgtggtcgttacggcgggagacgggacaaccacttccgcc
tataccgtcgtggtgcaacgcagcgggcaggcaccggtcgcgggttcggacagcaccagc
gtggcgtttaacagcagcaataacgccatcaccctgcccctttccggcggaacagccaca
tcggtggcggtaacgtctccacccgcacacggctccgttgtcatcacgggaaccaccgcc
acttacacgccggtgagcaactattctggcgcggacagtttcagttataccgccagcaat
acgtggggaacgtccactccggcgaccatcagcctgacgatttctgcgcccacgattacc
ctttcccccgcgacactcgcagcagcgacttccggcaccacttatgcccagacattcacg
gcaagcggcggttcgggcaattacagtttctcgatatcaggcacattaccaccgggttta
acattcacaccgggtggcgaactttcgggaatcccggcagcggcgggaagttatcacttt
acgattattgcgcaggatacggcgaacgccgcgtcggggacgcaaaactacacaataacg
gtttccgggcaggcaccggttgccaatgcggtcagcacgaccgtcacagggaacagcagc
aataatgccattgtgcccgcactttccggcggagcggcggcgtctgtcaccgttgccacc
gccccccttcatggcacggcggtcgcttccggcacatccctgagttatacgcccgttgcc
ggatattcaggtacggataccttcacctataccgccagcaataactggggaacctctgcg
ccagccaccgtcagcatccatgtgaccaacgtgacgctgagtttcacaccggccagcggc
acattgtcttccgccacggtgggcacgccgtggtcacagaccatcacggccagcagcggc
acgtcgccttatacctacagcgcgtccggcctgcccaccggactgacaatcagcgccagc
accggcgaaatttccggaacgccgacggtatcgggtagctatacaattcaggtcagcgct
gcggataacgccgggatcaccggcacggtcagttatcagcttaccgttgccggtcaggca
ccggtcgtcagcgcggtgtcatcaaccgtggccgccaatacccgtgagaatctgattgaa
ccgatgttatccggcggcgcagtcacatcgcttgccattgtgcaacaacccgcacacggc
actgcgcggatccaaagcctgaaaatccgctatacacccgtcgcgggatattccggcagc
gacagtttcatctacagcgcgtccaacaattttggcgcggcacaggcgacggtcacactt
aacgttaccgccacaacgctggcatttacccccgccagcggcgcgttgccggaaggtcgt
gcaggcacgtcttaccgtcagacgttcagcacttccggcggcacagcaccttatcagttc
cgcatttcaggcgttttacccgccggattagcactggctggcgataccctgagcgggacg
ccagccgccgcaggtaacagcaatttcacactgacggcgacggatgccagcggcgtaacc
agtcaggtcacgtatacgctcaatatcatcagtgcagagccggtgggtgcgagccatacc
gcttccgtactggccgggaaatcagtgcgcgtcaacctgaccgaaagcgccacaggcggc
ccgttcaccggcgcgcgccttgttgatttaccgccaaaaacattaggtaacgccacactc
ggagagagcgaaaacaacgtttatctggattttgatgcagccagtcaggcttccggcacg
gtggctcttcgctatgtgttgctgacgcaagattcacaatctgcgcctgcgacggtgaca
ttcaccattgccggacgccctgatccgtcaaaagacccggatgttctcggtctggtcagt
gcccagattcagtcggcacagaattttgcgcgcgctcagatccgtaacttcagcgatcgt
ctggaaaccctgcacaatccggccagtgttcacagcgggatgaacggtatccgctttaac
atgccgtcgtctaaaaaagaacgcggacttgacgatacgctgtggaattctgcctgggaa
aataaccgtcagacccccgaattgccccagctgacagataaaacctccgcgcagcatccg
cttaaccgcaataactcacgcatcaattactggaccggaggttttgtcgattttggtcat
tccggcaaagacggcgcgagtttcagccatacgctggtggggatcagcaccggcgcagac
tatcagttcacccctgaatttaccgcaggcatggggattggttttggccgggacgtcagc
gacattggcgacagcggctcccgcagcaacgggcgctccgtcagttcagcgttttatggc
agttatcatccggacaactactttatcgatggcctgatcggctacagccatctggactat
gacagccgccgctacgtgacagaaatggatcacttcgcacgcggcgaccgtggtggttat
caggtgtttggcgccgtcaccacgggttacgattaccgcctgccagacctgcttatttcc
ccttacggacgtctgcaattatcgcgcacccgtctgaacagctacaccgaatcgaacgcc
gacgcctatgatttagcctttgcctcacaagtgctgaatgacgtcaccggcgccgttggg
atccggacgcagtacgcgttgccgctgacctggtcgatgttgcgctggcaaagccgtgtt
gaatacacgcacgccttcagcgatcagggccgcgcccgtctcggttatgcggacagcggc
aatgacagctggagcgcagaggtcttcggcgacagtcaggaaaatatcgtgctgggcatg
gggctggatttcctgctgccacacaacattacgccgggcatcgcgtatcagggaacgctg
gggctggatgctgcgcgcagccgttcgcagatgatcatggtaagggtgaatatcggattc
tga
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