Rhodopseudomonas palustris HaA2: RPB_2678
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Entry
RPB_2678 CDS
T00321
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00550
Peptidoglycan biosynthesis
rpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPB_2678
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpb01002
]
RPB_2678
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
RPB_2678
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RPB_2678
Peptidases and inhibitors [BR:
rpb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RPB_2678
Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RPB_2678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ABD07380
UniProt:
Q2IWN0
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All DBs
Position
3059834..3061093
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AA seq
419 aa
AA seq
DB search
MVLFTDLPTIRSRRRLPRWRALLVGLLVMTIGSNQALAANQSVQGAKKEDVAGGYDTDAP
SAILIDGESGSVLFEKNADELRAPSSMLKLMTVELVFHLLAKGEIKPTDEYKISEYAWRR
GGAPAGNSTMFAEIHSKVAVEDLLKGAIIQSGNDSCIALAEGIAGSEPAFVERMTKRARE
IGLTQSTFANSNGLPDPGNKMSVRELGRLARHIIQTYPNDYKLFSEKEFTWNKIRQTNRN
PLLNTFNGADGLKTGYTKDGGYGMVGSAVQNGMRLIVVVNGIDDIDDRASEVKKLLEWGF
RNFESRALFASDATIGYARVFGGEKRYVPLIPAEPVRVMVRKNGSDRLIARIVYTGPVAA
PVDAGRRIGVVRVWRGPNLAVEVPLQAAETNPVGSTMRRAMDGASELVIGVFRAGMAKL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggttctgttcaccgacttgccgaccatccgatcgcgccgccgcctgccgcgctggcgc
gcgctgttggtcggcctgctggtcatgacgatcggatcgaaccaggcgttggctgcgaac
cagagcgtgcagggcgccaagaaggaagacgtcgccggcggctacgacaccgatgcgccg
agcgccatcctgatcgacggtgaaagcggcagcgtgctgttcgagaagaacgccgacgaa
ttgcgcgcgccgtcgagcatgctgaagctgatgaccgtggagctggtgtttcacctgctg
gccaagggtgagatcaagccgaccgacgagtacaagatcagcgaatacgcatggcgccgc
ggcggcgcgccggccggcaactcgacgatgttcgccgaaattcacagcaaggtcgcggtg
gaggacctgctcaagggcgcgatcatccagagcggcaacgattcctgcatcgcgctggcc
gaaggcatcgccggcagcgagccggcattcgtcgagcggatgaccaagcgggcgcgtgag
atcgggctgacgcaatcgaccttcgcgaattccaacggtctgcccgatcccggcaacaag
atgagcgtgcgcgaactcggccggctcgcgcgccacatcatccagacctatccgaacgac
tacaagctgttcagtgagaaggaattcacctggaacaagatccggcagaccaaccgcaac
ccgctgctgaatacgttcaacggcgccgacgggttgaagaccggctacaccaaggacggc
ggctacggcatggtcggctctgcggtgcagaacgggatgcggctgatcgtggtggtcaac
gggatcgacgacatcgacgatcgagccagcgaggtcaagaagctgctggaatggggcttc
cgcaacttcgaatcgcgcgcgctgttcgcttcggacgcgacgatcggctatgcgcgggtg
ttcggcggtgagaagcgttacgtcccgttgatcccggccgagccggtgcgggtgatggtg
cgcaagaacggcagcgaccggctgatcgcgcggatcgtgtataccggcccggtcgcagcg
ccggtcgacgccggccgccgcatcggcgtggtgcgggtgtggcgcggccccaaccttgcg
gtcgaagtgccgctgcaggcggccgagaccaatccggtcggctcgaccatgcgccgcgcc
atggacggcgccagcgagttggtgatcggggtgtttcgcgccggcatggcaaagctctga
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