Rhodopseudomonas palustris HaA2: RPB_4617
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Entry
RPB_4617 CDS
T00321
Name
(GenBank) ATP dependent DNA ligase
Organism
rpb
Rhodopseudomonas palustris HaA2
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABD09300
UniProt:
Q2IR60
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Position
5217870..5219738
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AA seq
622 aa
AA seq
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MNRFAELLDRLAYEPGRNNKLRLITNYFRATEDPDRGYALAALTGALSFRHAKPGLIRTL
IAERTDPVLFGLSYDYVGDLSETVALMWPAPRGRASSPPPCGEGACPGLDPGSGVGVDNG
SFSSAHPHPTPLPQAGEGARSPSGEHTSPLSDAATKAGHNNPPPPTLTDIVTTLHSLGKA
ELPAQLARWLDELDETGRWALLKLVTGGLRIGISARLAKTAAAALGDKDPHDVELVWPGL
EAPYLDLFAWLDGRGPQPVNRDPAPFRPVMLAHAVEDADFEAMTPADYIAEWKWDGIRVQ
AVSGIGDDGETVVRLYSRSGEDITMSFPDLLPSLRLPGAIDGELLVLREGRVQSFNVLQQ
RLNRKSVTPKLIKEYPIHLRAYDLLGDGDADLRIQPFVDRRARLERFIARLDDPRVDLSP
TVAFDDWDGLRAARRDPASAGAGLDADAVEGVMLKRRDALYLPGRPKGQWWKWKHDPHII
DAVLMYAQRGHGKRSSYYSDYTFGVWTEGDDGDQLVPVGKAYFGFTDEELLQIDRFVRRN
TTEKFGPVRHVVHEPDQGLVLEVAFEGLQRSPRHKSGVAMRFPRISRLRWDKPPRDADRL
ATLERMLKADTAGPEKAAPSSH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggttcgccgaattgctcgaccgcctcgcctatgagcccggccgcaacaacaag
ctgcggctgatcaccaattacttccgcgccaccgaagaccccgaccgcggctatgcgctg
gccgcgctgaccggcgcattgtcgtttcgccacgccaagcccggcctgatccggactctg
atcgccgaacgcaccgatccggtgctgttcggcctgtcctacgactatgtcggcgacctg
tcggagacggtcgcgctgatgtggcctgcgccgcgaggccgagcctcctcccctccccct
tgcggggagggagcctgccccggacttgatccggggtcgggggtgggggtcgacaacggg
agcttttcctcggcgcaccctcaccccacccctctcccgcaagcgggagagggagcgcgc
agtccgtcgggtgaacacacctctccactatccgacgcagcaacgaaagctggccacaac
aacccgccgccgccgacgctcaccgacatcgtcaccacgctgcacagcctcggcaaggcc
gagctgccggcgcagcttgcgcgctggctcgacgaactcgacgagaccggacgctgggcg
ttgttgaagctcgtcacgggcggcctgcggatcggcatctcggcgcgcctcgcaaagacc
gctgccgcagcgctcggcgataaggatccgcacgacgtcgaactggtctggcccgggctc
gaggcgccctatctcgacttgttcgcctggctcgacggccgcggcccgcagccggtcaac
cgcgatccggcgccgttccgcccggtgatgctggcgcatgcggtcgaggacgccgacttc
gaggccatgaccccggccgactacatcgccgaatggaaatgggacggcatccgcgtccag
gcggtgagcggcatcggcgacgacggcgaaaccgtggtgcggctgtattcgcgcagcggc
gaggacatcaccatgagcttcccggacctgttgccatcgctgcggctgcccggcgcgatc
gacggcgaactcctggtgctgcgcgaaggccgggtgcagtcgttcaacgtgctgcagcaa
cggctcaaccgcaaatcggtgacgccgaagctgatcaaggagtatccgattcatctgcgc
gcctacgacctgctcggcgacggcgacgcggatctgcggatacagcccttcgtcgatcga
cgtgcgcggctcgagcgcttcatcgcacggctcgacgaccccagagtcgatctttcgccg
acggtcgcgttcgacgattgggacggcttgcgggcggcgcggcgcgatccggccagcgcc
ggcgccggcctcgacgccgacgcggtcgagggcgtgatgctgaagcggcgcgacgcgctg
tatctgcccggccggccgaaaggccagtggtggaagtggaagcacgacccgcacatcatc
gacgcggtgctgatgtacgcccagcgtggccacggcaagcgctcgtcttattactccgac
tacactttcggggtctggactgaaggcgacgacggcgaccagctcgttccggtcggcaaa
gcctatttcggcttcaccgacgaggagctgctgcagatcgaccgcttcgtccgccgcaac
accaccgagaaattcggcccggtccgccatgtcgtgcacgagcccgaccagggcctggtg
ctggaagtcgcgttcgaggggctgcaacgctcgccgcggcacaagtccggcgtggcgatg
cggtttccgcgaatcagccggctgcgctgggacaagccgccgcgcgacgccgaccggctg
gcgacgctggaacggatgctgaaggccgacaccgccggccccgaaaaagccgccccgagc
agccattga
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