Rhodopseudomonas palustris BisB18: RPC_0735
Entry
RPC_0735 CDS
T00336
Definition
(GenBank) 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00071
Fatty acid degradation
rpc00280
Valine, leucine and isoleucine degradation
rpc00281
Geraniol degradation
rpc00310
Lysine degradation
rpc00362
Benzoate degradation
rpc00380
Tryptophan metabolism
rpc00410
beta-Alanine metabolism
rpc00640
Propanoate metabolism
rpc00650
Butanoate metabolism
rpc00903
Limonene and pinene degradation
rpc00930
Caprolactam degradation
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
rpc01120
Microbial metabolism in diverse environments
rpc01130
Biosynthesis of antibiotics
rpc01200
Carbon metabolism
rpc01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RPC_0735
00650 Butanoate metabolism
RPC_0735
09103 Lipid metabolism
00071 Fatty acid degradation
RPC_0735
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPC_0735
00310 Lysine degradation
RPC_0735
00380 Tryptophan metabolism
RPC_0735
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RPC_0735
09109 Metabolism of terpenoids and polyketides
00903 Limonene and pinene degradation
RPC_0735
00281 Geraniol degradation
RPC_0735
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RPC_0735
00930 Caprolactam degradation
RPC_0735
Enzymes [BR:
rpc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RPC_0735
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RPC_0735
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RPC_0735
SSDB
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
DAO
FAD_binding_3
F420_oxidored
GIDA
NAD_binding_8
ApbA
Pyr_redox_2
LSDAT_euk
Sacchrp_dh_NADP
2-Hacid_dh_C
Other DBs
NCBI-ProteinID:
ABD86306
UniProt:
Q21BD0
LinkDB
Position
complement(804661..806877)
AA seq
738 aa
MAFKNFTIETDADGIALLTWDSPGRSMNVLDVTSIEELGAIVDQTTADAAVKGVVITSGK
EAFCAGADLAMLEALNKQFAEARKSKGEDAAQNMLFDESRKLSQILRKLETSGKPWVAAI
NGLALGGGFEVTLACHHRIAADNPKTKLGLPEIKVGLFPGGGGTQRLPRILQPADAMQML
LKGEQVNLAKAKASKIVDAIVPAADLIQAAKDWIKGGGKAIAPWDEKGFKLPGGPVFSKQ
GMMIFPAGNAIYRRETYDNYPAARAIMSCAYEGLLLPIDAALRVESRYFAHILQTKEAAA
MIRSLFISMQELNKGARRPQNVPPTKVKKLAIIGAGFMGASVGYVSAKGGIEVVLIDRDQ
DSADKGKAHCKSVIDGLIAKGRAKEADRDAILGRITATPDYNAIKDCDLVIEAVFEDRKV
KAETYAKAQPLLKEGAIFASNTSTLPITSLAEEFQDQSRFIGIHFFSPVEKMMLVEIIVG
KNTGDVALATALDYVRQISKTPIVVNDSRGFFANRCVLRFTAEGLEMLMEGIPPAMIENV
AKMAGMPVGPLSLADEVALDLVLKIMKATEADLGEQAVDQQQKKLMIELVEKQGRFGRKN
AKGFYDYPEKGKGQKSLWAGIAALQPKHLDPDTIDIEELKQRFLVVQAVEAARTVEDHVI
TDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEAKYGSRFTPPKLLEDMA
KTGETFYGRFPPKKLAAA
NT seq
2217 nt
+upstream
nt +downstream
nt
atggccttcaagaatttcacgatcgagaccgacgccgacggcatcgcgctgctgacctgg
gacagtcccggccgttcgatgaacgtgctggacgtcaccagcatcgaagagctcggcgcc
atcgtcgaccagaccaccgccgacgccgcggtcaagggcgtggtgatcacctccggcaag
gaggcgttctgcgccggcgccgatctggcgatgttggaagctctgaacaagcagtttgcc
gaggcccgcaagtccaaaggcgaagacgccgcgcaaaacatgttgttcgacgagagccgt
aagctgtcgcagatcctgcgcaagctggagacttccggcaagccgtgggtcgcggcgatc
aacggcctcgcgctcggcggcggcttcgaagtgacgctggcctgccatcaccgcatcgcc
gccgacaatccgaagaccaaactcggcctgccggagatcaaggtcgggctgttcccgggc
ggcggcggcacccagcggctgccgcgcattctgcagccggccgacgccatgcagatgctg
ctgaagggcgagcaggtcaatctcgccaaagcgaaagcttcgaagatcgtcgacgccatc
gtgccggcggcggatttgatccaggccgccaaggattggatcaagggcggcggcaaggcc
atcgcaccctgggacgagaagggcttcaagctgcccggcggcccggtgttctccaagcag
ggcatgatgatcttcccggccggcaacgcgatctatcgccgcgaaacctacgacaactat
cccgccgcccgcgccatcatgagctgcgcctatgagggcctgttgctgccgatcgacgcc
gcgttgcgcgtcgagtcgcgctacttcgcccacatcctgcagaccaaggaggccgcggcg
atgatccgcagcctgttcatctcgatgcaggaattgaacaagggcgcgcggcggccgcaa
aacgtgccgccgaccaaggtcaagaagctcgcgatcatcggcgccggcttcatgggcgcc
agcgtcggctacgtctccgccaagggcggcatcgaggtggtgctgatcgaccgcgatcag
gacagcgccgacaagggcaaggcgcattgcaagagcgtgatcgacgggctgatcgccaag
ggccgcgccaaggaagccgaccgcgacgcgattctgggccggatcaccgcgaccccggac
tacaatgcgatcaaggattgcgacctcgtcatcgaggcggtgttcgaggatcgcaaggtc
aaggccgagacctacgccaaggcgcagccgctgctcaaggaaggcgcgatcttcgcctcc
aacacctcgacgctgccgatcacctcgctggccgaagagttccaggaccagtcgcgcttc
atcggcatccatttcttctcgccggtcgagaagatgatgctggtggaaatcatcgtcggc
aagaacaccggtgacgtcgcactcgccaccgcgctcgactacgtccgccagatcagcaag
accccgatcgtggtcaatgacagtcgcggcttcttcgccaaccgctgcgtgctgcgcttc
accgccgagggcctggaaatgctgatggaaggcattccgccggcgatgatcgagaacgtc
gccaagatggccggcatgccggtcggcccgctgtcgctcgccgacgaagtggcgctcgat
ctggtgctgaagatcatgaaggccaccgaggccgatctcggcgaacaggcggtcgatcag
cagcagaagaagctgatgatcgaactggtcgagaagcagggccggttcggccgcaagaac
gccaaggggttttatgactatccggagaagggcaagggccagaagagcctgtgggccggc
atcgccgcgctgcagccgaagcatctcgatccggatacgatcgacatcgaggaattgaag
cagcgctttttggtggtgcaggcggtcgaagccgcgcgcaccgtcgaggatcacgtcatc
accgatccgcgcgaggccgacgtcggctcgatcctcggcttcggcttcgccccgttcacc
ggcggcacgctgagctatatcgacttcatgggcaccaaagagttcgtggcgctgtgccac
aagctggaggccaaatacggctcgcgcttcaccccgccgaaacttctggaagacatggcg
aagaccggcgagaccttctacggccgcttcccaccgaagaagctggcggcggcgtaa
DBGET
integrated database retrieval system
