Rhodopseudomonas palustris BisB18: RPC_2837
Help
Entry
RPC_2837 CDS
T00336
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00450
Selenocompound metabolism
rpc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RPC_2837
Enzymes [BR:
rpc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RPC_2837
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RPC_2837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABD88385
UniProt:
Q213Q1
LinkDB
All DBs
Position
complement(3078486..3079733)
Genome browser
AA seq
415 aa
AA seq
DB search
MTTHPAVSNGSYDVARVREDFPALALKVYGKPLIYLDNAASAQKPRVVLDRMTQAYENEY
ANVHRGLHYLANAATEAYEGGRARVTSFLNARRPEEIIFTRNATEAINLVASSWGAPNIG
EGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAEVDDDGNFLLEEFEKQLTAKTKLVAIT
QMSNALGTVVPVKEVVRIAHARGIPVLVDGSQAAVHMAIDVQDIDCDFYVMTGHKVYGPT
GIGVLYAKYDHLVAMRPYCGGGEMIREVSRDVVTYGDPPHKFEAGTPAIVEAVGLGAAID
YVNSIGKARIAAHEHDLLDYAQAQLREINSVRIIGTARDKGPVISFEMKGAHPHDIATVI
DRSGIAVRAGTHCVMPLLERFQVTATCRASFGMYNTREEVDQFVQALIKARDLFS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacatcccgcggtttccaatggaagctatgacgtcgcgcgtgtgcgcgaggat
ttccccgcgctggcgctcaaggtctatggcaaaccgctgatctatctcgacaacgccgcc
tcggcgcagaagccgcgggtggtgctggatcgcatgacgcaggcctatgagaacgaatac
gccaacgtgcatcgcgggctgcattatctcgccaacgcggcgaccgaggcctatgagggc
ggccgcgcgcgggtcaccagcttcctcaacgccaggcggccggaagagatcatcttcacc
cgcaacgccaccgaggcgatcaacctcgtggcgtcgtcgtggggcgcgcccaatatcggc
gagggcgacgagatcgtgctctcgatcatggagcaccattccaacatcgtgccgtggcat
ttcctgcgcgaacgccagggcgcggtgatcaaatgggcggaggtcgacgacgacggcaac
ttcctgctggaagaattcgaaaagcagctgacggcgaagaccaagctggtcgcgatcacc
cagatgtcgaacgcgctcggcaccgtggtgccggtcaaggaggtggtgcggatcgcgcac
gcccgcggcattccggtcttggtcgacggcagccaggccgcggtgcatatggcgatcgac
gtccaggacatcgactgcgacttctacgtcatgaccggccacaaggtttatggcccgacc
gggatcggcgtattgtacgccaaatacgatcacctggtggcgatgcggccgtattgcggc
ggcggcgaaatgatccgcgaagtgtcgcgcgacgtcgtgacttatggcgatccgccgcac
aaattcgaggccggcacgccggcgatcgtcgaggcggtgggattgggcgccgcgatcgac
tacgtcaattcgatcggcaaagcgcggatcgcggcgcacgagcacgatctgttggactac
gcccaggcgcagctgcgcgagatcaattcggtgcgcatcatcggcaccgcccgcgacaag
gggccggtgatctcgttcgagatgaagggcgcgcatccgcacgacatcgccacggtgatc
gaccgctccggcatcgcggtgcgcgcgggaactcactgcgtgatgccgcttttggagcga
ttccaagtcaccgcgacgtgtcgggcctcgtttgggatgtataacacccgcgaggaagtc
gaccaattcgtacaggcgctgatcaaggcgcgggatttgttctcatga
DBGET
integrated database retrieval system
