Rhodopseudomonas palustris BisB18: RPC_4089
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Entry
RPC_4089 CDS
T00336
Name
(GenBank) Pyrimidine nucleoside phosphorylase-like
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00240
Pyrimidine metabolism
rpc01100
Metabolic pathways
rpc01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RPC_4089
Enzymes [BR:
rpc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
RPC_4089
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Gene cluster
GFIT
Motif
Pfam:
PYNP_C
Glycos_trans_3N
Glycos_transf_3
DUF2254
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ABD89615
UniProt:
Q20Z21
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All DBs
Position
complement(4542803..4544344)
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AA seq
513 aa
AA seq
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MTSADAPRPQLKIRLIHLDTGRENVAVMSRRSKALRPEVFSGFSRVEIRRNAKSVLATLL
ITDDDALVGPDELGLAEPAFRRFGEPAGTFVTVSPATPPDSLDAVRGKIQGRTLSAAEIT
AIVNDLTRYRYSDMEIAAFLIGAARFMTSDELLALVSAMASVGTQLRWDRPIVVDKHCIG
GIPGNRTSMILVPIVAAHGLTIPKTSSRAITSPAGTADTMEVLARVDVSVAEMKEIVAAC
NGCLIWGGHVNLSPADDILISVERPLCLDTREQMVASIMSKKLAAGSTHLLVDLPVGPTA
KVASALDAMRLRKLFEFVGDHFGIAVETITTDGRQPIGNGIGPVLEAQDVMAVLGNDPKA
PADLREKSLRLAAHLLEYDPHLRGGAGYARARELLESGAALKQMQKIIDNQGPSTCHKDL
GTLTAEVTAERDGVVSAIDCLQLNRLARTAGAPIDKGAGIRLFKKVGDRVEAGEPLYRIY
AFDPAERELAVAAAKLACGYTVDDAQTFREQVM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgccgacgcgccccgcccgcaactcaagatccgcctgatccatctcgacacc
ggccgcgaaaacgtcgcggtgatgtcgcggcgctcaaaggcgctgcgcccggaggtgttc
agcggcttcagccgggtcgagatccgccgcaatgcgaagtcggtgctggcgaccttgctg
attaccgacgacgacgcgctggtcgggccggacgaactcggcctcgccgagccggcgttc
cggcgtttcggcgaacccgccgggaccttcgtcacggtgtcgccggcgacgccgccggac
agtctcgacgcggtgcgcggcaagatccagggccgcacgctgagcgcggcggagatcacc
gccatcgtcaacgatctcacccgctatcgttattccgacatggagatcgccgccttcctg
atcggcgcggcgcggttcatgacttcggacgaactgctggcgctggtgtcggcgatggcc
tcggtcggcactcagttgcgctgggatcgcccgatcgtggtcgacaagcattgcatcggc
ggcattcccggcaatcgcacctcgatgatcctggtgccgatcgtcgccgcgcacgggctg
acgattccgaaaacctcgtcgcgcgccatcacctcgccggccggcaccgccgataccatg
gaggtgttggcgcgggtcgatgtcagcgtcgcggaaatgaaagagatcgtcgccgcctgc
aacggctgtctgatctggggcggccacgtcaatctctcgcccgccgatgacatcttgatc
tcggtggagcggccgctgtgtctcgacacccgcgagcagatggtggcctcgatcatgtcg
aagaagctcgccgccggctcgacgcatctgttggtcgatctgccggtcggcccgaccgcc
aaggtcgccagcgcactcgacgcgatgcggctgcgcaagctgttcgaattcgtcggcgat
catttcggcatcgcggtggagaccatcaccaccgacggccggcagccgatcggcaacggc
atcggcccggtgctggaggcgcaggacgtcatggcggtgctcggcaacgatccgaaggct
cccgccgatctgcgcgaaaaatcgctacggttggcggcgcatctgttggaatacgatccg
catctgcgcggcggcgcgggctacgcgcgggcccgcgagttgctggaaagcggcgcggcg
ctgaagcagatgcagaagatcatcgacaatcaggggccttcgacctgtcacaaggacctc
ggaacgctgaccgccgaggtgacggcggagcgcgacggcgtggtgtcggcgatcgattgc
ctgcagctcaatcggctggcgcgcaccgccggcgcgccgatcgacaagggcgccggcatc
cggctgttcaagaaggtcggcgatcgtgtcgaggccggcgagccgctgtatcgaatttac
gccttcgatccggccgagcgcgaactcgcggtggctgccgccaagctcgcctgcggttac
acggtcgacgacgcgcaaacctttcgcgagcaggtgatgtag
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