Rhodopseudomonas palustris BisB5: RPD_0958
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Entry
RPD_0958 CDS
T00345
Name
(GenBank) sulfide dehydrogenase (flavoprotein) subunit SudA / sulfide dehydrogenase (flavoprotein) subunit SudB
KO
K00266
glutamate synthase (NADPH) small chain [EC:
1.4.1.13
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00250
Alanine, aspartate and glutamate metabolism
rpd00910
Nitrogen metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RPD_0958
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RPD_0958
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
RPD_0958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
DHODB_Fe-S_bind
Pyr_redox_3
Pyr_redox
NAD_binding_8
Thi4
FAD_oxidored
AlaDh_PNT_C
DAO
NAD_binding_1
HI0933_like
FMO-like
FAD_binding_3
NAD_binding_7
2-Hacid_dh_C
DUF1414
PALP
XdhC_C
NAD_binding_6
Motif
Other DBs
NCBI-ProteinID:
ABE38196
UniProt:
Q13CJ3
LinkDB
All DBs
Position
complement(1079016..1081850)
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AA seq
944 aa
AA seq
DB search
MSSVTGTIPNEVLRYEQARSTLETSRNELEELQHSEAVGVFQKQIALLQKRLLNDPASLR
NMFISDGTQAIVWEFQQSELGAAFTTMLWELLKRDDDMSAILQRFIWALPLKFKRKFIKA
IDVHLRERYPMFENLSEGWPGETFIPPYIRPAEERAVDFDLVNQGYLGYQSIGYSLRECE
LFVWLEVLRDKQCDDKPCEIGILVHGKSEPKGGCPVKIHIPEMLDLLGTGRHREALELIE
SCNPLPNVTGRVCPQELQCQGVCTHTKRPIEIGQLEWYLPEHEKLVNPNANDRFLGRVSP
WAAAAKPPIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLGGVLRYGIPEFRLPNTLID
DVVEKITLLGGRFVKNFVVGKTATLEDLKAEGFWKIFVGTGAGLPTFMNVPGEHLLGVMS
ANEFLTRVNLMRGLDDRYETPLPETKGKNVFVIGGGNTAMDAARTAKRLGGNVTIVYRRT
QSEMPARVEELHHALEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSP
KPTGEIERVPVDLVIMALGNTANPIMKDAEPGLKTNKWGTIEVEQGSQRTSIKDVYSGGD
AARGGSTAIRAAGDGQAAAKEIVGEIPFTPAEIKTRVERAARYTELGQIAQTIVNKVPLA
GGIVEFTVRAPMVARSAQAGQFVRVLPWEKGELIPLTLADWDVEKGTIDLVVQGMGTSSL
EINRMAIGDAFSGVAGPLGRASELHRYEGNQTVVFCAGGVGLPPVYPIMRDHLRLGNHVT
LISGFRAKEFLFWTGDDERVGKLKQEFGDQLSLIYTTNDGSYGVKGFVTGPLEEMMKANQ
QGIGRTIAEVVAIGPPLMMRAVSDLTKPYGVKTVASLNSIMVDATGMCGACMVPVTIDGK
MVRKHACIDGPEIDAHIIDWDKFLPRFNAFKAQELESKAKHGFA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtcaccggcacgatccccaacgaggtgctgcgctacgaacaggcgcgcagc
acactcgaaacatcgcgtaacgagctggaagagctgcagcacagcgaggctgtcggcgtc
ttccagaagcagattgcgctgttgcagaagcggctgctgaacgacccggcgtcgctgcgc
aacatgttcatctccgacggcacccaggcgatcgtctgggagttccagcaaagcgaactc
ggcgcagctttcaccacgatgctgtgggagctgctcaagcgcgacgacgacatgagcgcg
atcctgcagcgcttcatctgggcgctgccgctcaagttcaagcgcaagttcatcaaggcg
atcgacgtgcatctgcgcgaacgctatccgatgttcgaaaacctgtcggaaggctggccg
ggcgagacattcatcccgccttacatccgcccggctgaagagcgggcggtcgacttcgac
ctcgtcaaccagggctatctcggttaccagtcgatcggctactcgttgcgtgaatgcgag
ctgttcgtctggctggaagtgctgcgcgacaagcagtgcgacgacaagccgtgcgagatc
ggcatcctggtccacggcaagagcgagccgaagggcggctgcccggtgaagatccacatc
cccgagatgctggacctgctcggcaccggccggcatcgcgaagcgctggagctgatcgag
agctgcaacccgctgccgaacgtcaccggccgcgtctgcccgcaggaactgcagtgccag
ggcgtctgcacccataccaagcgcccgatcgagatcggccagctcgaatggtatctgccc
gagcacgagaaactggtgaaccccaacgccaatgaccgcttcctcggtcgggtctcgcca
tgggcggcggccgcgaaaccgccgatcgcggtggtcggctccggcccgtcgggcctgatc
aacgcctatctgctggcggtcgaaggcttccccgtcacgatcttcgaggcgttccacgat
ctcggcggcgtgctgcgttatggcattccggaattccggctgcccaacacgctgatcgac
gacgtggtcgagaagatcacgctgctcggcggtcgcttcgtgaagaatttcgtggtcggc
aagaccgcgacgctggaagacctcaaggccgagggcttctggaagatcttcgtcggcacc
ggcgccgggcttccgaccttcatgaacgtgccgggcgagcatctgctcggcgtgatgtcg
gctaacgagttcctgacccgcgtcaatctgatgcgcggcctggacgatcgctacgagacg
ccattgcctgaaaccaaaggcaagaacgtgttcgtgatcggcggcggcaacaccgcgatg
gacgcggcgcgcaccgccaagcgactcggcggcaacgtcaccatcgtgtatcgccgcacc
cagagcgaaatgccggcgcgcgtcgaggagctgcatcacgcgctcgaagaaggcatcaat
ctcgcggtgctgcgggcgccgcgtgagttcatcggcgacgaccacacccacttcgtcacc
cacgcgctgctcgacgtcaacgaactcggcgaaccggacaagtccggccgccgcagcccg
aagccgaccggcgagatcgaacgcgtgccggtcgacctggtgatcatggcgctgggcaac
accgccaacccgatcatgaaggacgccgagcccggcctgaagaccaacaaatggggcacc
atcgaggtcgagcagggttcgcagcgcacctcgatcaaggacgtctactcgggcggcgac
gccgcgcgtggcggctccaccgcgatccgtgcggccggcgacggccaggccgcggccaag
gaaatcgtcggcgagatcccgttcaccccggctgagatcaagacccgcgtcgaacgtgcg
gcgcgctataccgagctcggccagatcgcgcagaccatcgtcaacaaggtgccgctggcc
ggcggcatcgtcgagttcacggtgcgcgccccgatggtggcgcgttcggcgcaggccgga
caattcgtccgcgtgttgccgtgggagaagggcgaactgatcccgctgacgctcgccgac
tgggatgtcgaaaagggcaccatcgatctggtggtgcagggcatgggcacctcgtcgctg
gagatcaaccggatggcgatcggcgacgcgttctctggcgtcgccggcccgctcggccgc
gcctcggagctgcatcgctacgagggcaaccagaccgtggtgttctgcgccggcggcgtc
ggcctgccgccggtctatccgatcatgcgggatcatctgcggctcgggaaccacgtcacg
ctgatctccggcttccgcgccaaggagttcctgttctggaccggcgacgacgagcgcgtc
ggcaagctcaagcaggagttcggcgaccagctgtcgctgatctacaccaccaatgacggc
agctatggcgtcaaaggcttcgtcaccggaccgctcgaagagatgatgaaggccaaccag
cagggcatcggccgcaccatcgcggaggtggtcgcgatcggcccgccgctgatgatgcgg
gcggtctccgacctgaccaagccgtatggcgtgaagacggtggcgagcctcaactcgatc
atggtggacgccaccggcatgtgcggcgcctgcatggtgccggtgacgatcgacggcaag
atggtgcgcaaacacgcctgcatcgacggcccggagatcgacgcccacatcatcgactgg
gacaagttcctgccgcgcttcaacgccttcaaggcgcaggagctggagagcaaggccaag
cacggcttcgcgtaa
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