Rhodopseudomonas palustris BisB5: RPD_1473
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Entry
RPD_1473 CDS
T00345
Name
(GenBank) putative urea/short-chain binding protein of ABC transporter
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd02010
ABC transporters
rpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPD_1473
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPD_1473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_1473
Transporters [BR:
rpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RPD_1473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ABE38710
UniProt:
Q13B29
LinkDB
All DBs
Position
complement(1641660..1642880)
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AA seq
406 aa
AA seq
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MFAKPLAAAMMTAALMSSSTAFAQVSDDIVKIGVLTDMNGPASTPTGQGSMTAAQMAIDD
FGGQVLGKPISVIVGDHQLKPDIGGALARRWYDVEQVDLIVDVPVSAVGLAVQNIANEKK
RMFITQSTGAADFHGKFCSPYTMQWVFDTRALAVGTAQEVVKRGGDTWFFITDDYAFGLS
LERDAAAVVTKAGGKVIGSVRPPFATPDLSSFVLQAQASKAKIIGIAGGPPNNINEIKTG
AEFGVFKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDRTREWSKRYFAKMNR
MPTMWQAGVYSAVTHYLQGIKEAGTDEPLKVAAKMREKPIEDFFSRNGKLREDGLMVHDL
MLVQVKSPEESKYPWDYYKILAHISGEEAFGPPDPACPLIKKQAAN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagcctctcgcggcggcgatgatgacggctgcgcttatgtcatcctcgacc
gcattcgcccaggtatccgacgacattgtcaagatcggtgtactgaccgatatgaacggt
cccgcgtcgacgccgaccggccagggttcgatgacggccgcgcaaatggcgatcgacgat
ttcggcggccaggtgctgggcaagccgatcagcgtcatcgtcggcgaccaccagctcaag
cccgacatcggcggcgctctggcgcggcgctggtacgacgtcgaacaggtcgacctgatc
gtcgacgtgccggtctccgcggtcggtctcgcggttcagaacatcgccaacgaaaagaag
cggatgttcatcacgcaatcgaccggcgccgccgattttcacggcaagttctgcagcccc
tacacgatgcaatgggtgttcgacacccgggcgctggcggtcggcaccgcgcaggaggtc
gtgaaacgcggcggcgacacctggttcttcatcaccgacgactacgccttcggcctgtcg
ctggagcgcgacgccgcggcggtggtgaccaaggccggcggcaaggtgatcggctcggtg
cgtccgccgttcgcgacgccggacctgtcgtccttcgtacttcaggcgcaagcctcgaag
gccaagatcatcggcatcgccggcggcccgccgaacaacatcaatgaaataaagaccggc
gccgagttcggcgtcttcaagggcggacaacagatggcggcgctgctggcgttgatcacc
gacatccattcgctcggcctgcccgccgcgcagggcctgttactgacgacgtcgttctat
tgggacatggacgacaggacccgcgaatggtcgaagcgctacttcgccaagatgaaccgg
atgccgacgatgtggcaggccggcgtgtattccgcggtgacacactatctgcaaggcatc
aaggaggccggcaccgacgagccgctcaaggtcgccgccaagatgcgcgagaagccgatc
gaggatttcttctcgcgcaatggcaaactgcgcgaggacggtctgatggtgcatgacttg
atgctggttcaggtcaagagcccggaggagtcgaaatatccgtgggactattacaagatc
ctcgcgcatatctccggtgaagaagcgttcggcccgcccgacccggcctgcccgttgatc
aagaaacaggcggcgaattga
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