Rhodopseudomonas palustris BisB5: RPD_1871
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Entry
RPD_1871 CDS
T00345
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00061
Fatty acid biosynthesis
rpd00071
Fatty acid degradation
rpd01100
Metabolic pathways
rpd01212
Fatty acid metabolism
rpd02024
Quorum sensing
Module
rpd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPD_1871
00071 Fatty acid degradation
RPD_1871
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPD_1871
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpd01004
]
RPD_1871
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpd04147
]
RPD_1871
Enzymes [BR:
rpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPD_1871
Lipid biosynthesis proteins [BR:
rpd01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RPD_1871
Exosome [BR:
rpd04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPD_1871
Exosomal proteins of breast cancer cells
RPD_1871
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF5488
Motif
Other DBs
NCBI-ProteinID:
ABE39106
UniProt:
Q139Y3
LinkDB
All DBs
Position
2094920..2096494
Genome browser
AA seq
524 aa
AA seq
DB search
MSQGELTQSHITQGHLSHGIVSGDRHRSFEEVNARAAQIAGGLQGLGVKPGDCVCVLMRN
DIAFLESAYAVMMLGAYMVPVNWHFKPEEVLYVLGDSGTRVLIGHADLLHHAAGIVPAAV
TMLSVPTPPEILASYSIDPDHRSAPAGAIDLDGWLAQQRPYDGPALPQPQNMIYTSGTTG
HPKGVKRFAPTPQQSANAEAMRAAIYGLKPGVRALCPGPLYHSAPNSFGIRAGRLGGVLA
LMPRFEPEALLQLIEQHRIDTVFMVPTMFIRLMKLPEAVRNKYDVSSLRHVIHAAAPCPP
DVKRAMIDWWGPVIYEFYGSTESGAVTFASSEDALKKPGTVGKIAAGAELVFVDDDNNEV
PQSEVGEIFSRIPGNPDFTYHNKPEKRAEIDRGGFITSGDMGYLDEDGYVFICDRKRDMV
ISGGVNIYPAEIEAALHAIPGVHDCAVFGIPDAEFGEALMAMLEPQPGVTLEQSNIREQL
RLSLAGYKVPKHIEIMAQLPREDSGKIFKRRLRDPYWAKAGRVI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaggcgagctcacccaaagccatatcacccaaggccatctctctcacggcatc
gtcagtggcgaccgccatcggtcgttcgaggaggtcaatgcgcgcgccgcgcagatcgcc
ggcgggctgcagggccttggcgtcaaacccggcgattgcgtttgcgtcttgatgcgcaac
gacatcgcctttcttgaatccgcctatgcggtcatgatgctcggcgcctacatggtcccg
gtgaactggcacttcaaaccagaagaggttctctacgtgctgggcgattccggcacgcgc
gttttgatcggccatgccgatctgctgcaccacgcggctggaatcgtgcccgcagccgtc
acgatgctgagcgtgccgacgccgccggaaatcctcgcgagctacagcatcgatcccgac
catcgctcggctcccgccggcgcgatcgatctcgacggctggctcgcgcagcagaggcca
tatgacggcccggcgctgccgcagccgcagaacatgatctacacctcgggcaccaccggc
catccgaagggcgtcaaacggttcgcgccgacgccgcaacagtcggcgaacgccgaagcc
atgcgcgcagcgatctacggcctgaagccgggcgtccgcgcgctgtgcccggggccgttg
tatcactccgcgccgaattcgttcggcattcgcgccggccggctcggcggagtgctggcg
ctgatgccgcggttcgaacccgaagcgctgctgcaactgatcgagcagcaccggatcgac
accgtgttcatggtgccgacgatgttcatccggctgatgaagctgccggaagcggtgcgc
aacaagtacgacgtgtcgtcgctgcgccatgtcatccatgccgcggcgccgtgtcccccg
gacgtcaagcgcgcgatgatcgactggtgggggccggtgatctacgaattctacggctcg
accgagagtggcgcggtgacgttcgcgagctccgaggatgcgctgaagaagcccggcacc
gtcggcaagatcgctgccggcgccgagcttgtgttcgtcgacgacgacaataacgaggtg
ccgcagagcgaggtcggcgagatcttctcgcggatccccggcaatccggatttcacctat
cacaacaagccggagaaacgcgcggagatcgaccggggcggcttcatcacctcgggcgac
atgggctatctcgacgaggacggctacgtcttcatctgcgaccgcaagcgcgacatggtg
atctccggcggcgtcaacatctatccagccgagatcgaggcggcgctgcacgcgatcccg
ggtgtgcacgactgtgcggtgttcgggattcccgacgccgaattcggcgaggcgctgatg
gcgatgctcgagccgcagcctggcgtcacactggagcagagcaatatccgcgagcagctc
aggctgtcgctcgccggctataaggttccgaagcacatcgagatcatggcgcagctgccg
cgcgaggactccggcaagatcttcaagcgccggctacgcgatccgtattgggccaaagct
ggtcgggtgatttag
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