Rhodopseudomonas palustris BisA53: RPE_2550
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Entry
RPE_2550 CDS
T00400
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03030
DNA replication
rpe03430
Mismatch repair
rpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPE_2550
03430 Mismatch repair
RPE_2550
03440 Homologous recombination
RPE_2550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpe03032
]
RPE_2550
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_2550
Enzymes [BR:
rpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPE_2550
DNA replication proteins [BR:
rpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPE_2550
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPE_2550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
ABJ06488
UniProt:
Q07NJ6
LinkDB
All DBs
Position
2814806..2818303
Genome browser
AA seq
1165 aa
AA seq
DB search
MSNAGFVHLHVHSAYSLLKGSIKIGKLADLAKADHQPALALTDTDNMFGALEFSDKMAGA
GIQPIVGCELAIDFGDVDPTARNALAAGPSRIVLLASRERGYRSLMKLNSRAFLETPVNQ
VPHIKLDWLLDEAEDLIALSGGPDGPISLAIAADQQALAETRCERLASLFGDRLYIELQR
HGVDAERRVEPALIDLAYAKGLPLVATNEPYFASTDDYEAHDALLCIASGKLIAETDRVQ
LTPDHRFKTRAEMAVLFADLPEALASTVEIAERCAFRPKTRKPILPFFTVGAGTGDTDAA
SLEAEELRVQAERGLAHRLEVHGLAQGVSEEDYRARLAFELDVITRMKYAGYFLIVSDFI
KWAKQQGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQ
DRRGEVITYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APVSLKQAIEGEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELV
PLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRGVHVALPTLPL
DDPDTFTMLARGDVVGVFQLESQGMRRALIDMRPDRFEDIIALVALYRPGPMANIPTYCA
RKHGDEEPEYLHPILEPILKETFGVIIYQEQVMQIAQVMAGYSLGEADLLRRAMGKKIRA
EMEKQRAIFVDGAMKNGVPKGQADTIFDLLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLEIHNTDKLSEFRAEAQRLGIKVEAPSVNRSGATFEVADGTIFYALAGLK
GVGQQAVEQIVAARQGGAFTSLADFAAKVNPRAINKRVIECLAAAGAFDQINPNRAAVSG
GAEAILAACQRHHEAQVVGQNDMFGGSADAPSIMLPPLEAWLPAERLRREYDAIGFFLSG
HPLDDYAVALKRLRVQSWAEFCRAVKSGATAGKVAATVVSRMERRTKTGNKMGIFGLSDA
TGHFEAVLFSEGLAQFRDVLEPGAAVLMQLGAELQGEDVRARILQAEPLDDAAAKTQKGL
RIFLRDTKPLDSIEKRLKSPDAAAIPAAPAAGRRSGGAGDGDVTLVMMLDLETEVEMKLP
GRFRVSPQIAGAIKAVSGVVDVQTV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgccggattcgttcatctgcacgtgcattcggcctattcgctgctgaagggc
tcgatcaagatcggcaagctcgccgatctggcgaaagccgaccaccagccggccttggcg
ctgaccgacaccgacaacatgttcggcgcgctggaattctccgacaagatggcgggcgcc
gggatccagccgatcgtcggctgtgagctcgcgatcgatttcggcgatgtcgatcccacc
gcccgcaacgcgctcgccgcgggcccgtcgcggatcgtgctgctggcgtcgcgcgagcgc
ggctatcgcagcctgatgaagctgaattcgcgggcgttcctggagaccccggtcaaccag
gtgccgcacatcaagctcgactggctgttggacgaggccgaggatctgatcgcgctctcc
ggcgggccggacgggccgatctcgctggcgatcgccgccgatcaacaggcgctggctgag
acgcgttgcgagcgtctggcctcgctgttcggcgaccggctctacatcgagttgcagcgc
cacggcgtcgacgccgagcgccgggtcgagccggcgctgatcgatctggcctatgccaag
gggctgccgctggtcgccaccaacgagccttattttgccagcaccgacgattacgaggcg
catgacgcgctgctctgcatcgccagcggcaagctgatcgccgagaccgaccgggtccag
ctcacccccgaccatcgcttcaagacccgcgccgaaatggcagtgctgttcgccgatctg
ccggaggccttggcgtccaccgtggagatcgccgagcgctgcgcgttccggcccaaaacc
cgcaagccgatcctgccgttcttcaccgtcggcgccggcaccggtgacaccgacgccgcc
agcctcgaggccgaggaattgcgcgtccaggccgagcgcggtctggcgcaccggctcgaa
gtgcacggcttggcgcaaggcgtcagcgaggaggactaccgcgcgcggctcgccttcgag
ctcgacgtcatcacccggatgaaatacgcgggctacttcctgatcgtgtccgacttcatc
aaatgggccaagcagcagggcattccggtggggccgggccgcggctccggcgcgggctcg
ctggtcgcctacgcgctgaccatcaccgacctcgacccgatccgcttcggcctgctgttc
gagcgcttcctcaatccggaacgcgtctcgatgccggacttcgacatcgacttctgccag
gaccgccgcggcgaggtgatcacctatgtgcaggagcgctacggccgcgatcaggtggcg
cagatcatcaccttcggcacgctgcaggctagaggcgtgctgcgcgacgtcggccgcgtg
ctgcagatgccgtacggccaggtcgacaagctgaccaaactggtgccgcagaatccggcg
gcgccggtgtcgctgaagcaggcgatcgagggcgagccaaagctgcaggcgttccgcgac
gaagacccggtggtggcgcgcgccttcgacatcgcgcagcgcctcgaaggcctcacccgc
cacgcctcgacccatgccgccggcatcgtgatcggcgaccggccgctgtccgagctggtg
ccgctgtatcgcgatccgaaatccgacatgccggtcacccagttcaacatgaaatgggtg
gagccggcggggctcgtcaagttcgacttcctcgggctgaagacgctgaccgtgctcgac
gtcgcggtgaaattgctcaagcagcgcggcgtccacgtcgcgctgccgacgctgccgctc
gacgatccggacacgttcacgatgctggcgcgcggcgacgtggtcggcgtgttccagctg
gaaagtcagggcatgcggcgcgcgctgatcgacatgcgccccgaccgcttcgaggacatc
atcgcgctggtggcgctgtatcgcccgggtccgatggcgaacatcccgacctattgcgcg
cgcaagcacggcgacgaggagccggaatatctacacccgatcctggagccgatcctgaag
gagacgttcggcgtcatcatctatcaggaacaggtgatgcagatcgcgcaggtgatggcg
ggctactcgctcggcgaagccgatctgctgcgccgcgcgatgggcaagaagatccgagcc
gagatggagaagcagcgcgccatcttcgtcgacggcgcgatgaagaacggcgttcccaag
ggacaggccgacaccatcttcgacctgctggcgaagttcgccgactacggcttcaacaag
agccacgccgccgcctatgcgctggtgtcgtaccacaccgcctacatgaaggcgcactat
ccggtggagtttctggcggcgtcgatgacgctggaaatccacaacaccgacaaactgtcg
gaattccgggccgaggcgcagcggctcggcatcaaggtggaagcgccctcggtcaatcgc
tcaggcgccactttcgaggtcgccgacggcaccatcttctatgcgctcgccgggctgaaa
ggcgtcggccagcaggccgtcgagcagatcgtcgctgcgcggcaaggcggcgccttcact
tcgctcgcggactttgccgccaaggtcaatccgcgcgccatcaacaagcgggtgatcgaa
tgtctcgccgccgccggcgcgttcgaccagatcaacccgaaccgcgccgcggtgtccggc
ggcgccgaggcgatcctggccgcctgccagcgccaccatgaggcgcaggtggtgggccaa
aacgacatgttcggcggcagcgcggacgcgcccagcatcatgctgccaccgctcgaggcc
tggctgccggcggagcggctgcggcgcgaatatgacgcgatcggcttcttcctctccggc
cacccgctcgacgattacgccgtcgcgctgaagcggctgcgggtgcagtcctgggccgag
ttctgccgcgcggtgaaatccggcgcgaccgctggcaaagtcgccgccaccgtggtgtcg
cggatggagcgccgcaccaaaaccggcaacaagatgggaatcttcgggctgtcggacgcc
accggccatttcgaggcggtgctgttttcggaggggctggcccagttccgcgacgtgctg
gagccgggcgccgcggtgctgatgcaactcggcgccgagctgcagggcgaggacgtccgc
gcccgcatcctgcaggccgagccgctggacgatgccgcggcaaaaacccaaaaaggcctg
cggatcttcctgcgcgacaccaagccgttggattcaatagaaaaacgtcttaaatcgccg
gacgcggcggcgataccggcggctccggcggccggccggcgatcaggcggggcaggggat
ggcgacgtcaccctggtgatgatgctcgatctcgaaaccgaggtggaaatgaaactgccc
ggccgcttccgggtctcgccgcagatcgccggcgcgatcaaggcggtgtcgggggtggtc
gacgtccagacggtgtga
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