Rickettsia philipii: RSA_07215
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Entry
RSA_07215 CDS
T01759
Name
(GenBank) N-terminus of bacteriophage-type DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rph
Rickettsia philipii
Pathway
rph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSA_07215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rph03400
]
RSA_07215
Enzymes [BR:
rph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RSA_07215
DNA repair and recombination proteins [BR:
rph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSA_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Nop
Motif
Other DBs
NCBI-ProteinID:
AFB26903
UniProt:
H6PVS3
LinkDB
All DBs
Position
complement(1233896..1234681)
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AA seq
261 aa
AA seq
DB search
MNNTLKWLSAVGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETVFNMNDKVHDNITL
ARSLADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGI
PFYGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALI
NPQLIILVGSTAATSLLGKNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQK
RTSWYDLLKIKEYLVNNRLLA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacgcttaaatggttaagtgcagtcggtgttgaatattattgccatgaacat
ccaccgcaattaaaggtacgtaataatactgaactaactgaaaagccacaagtaaaactt
atgtctacaaaagaaactgtattcaatatgaatgataaagttcatgataatataacccta
gcaagatctcttgccgataaagctaataatatcgaagaactaaaagaatctctactaaat
tttaatggttgtgaacttaagaaatttgctactaatacggttttcggtgacggtaatttg
gaagctaaaattatgttaataggcgaagccccgggaagtaccgaagatttgaaaggaata
cctttttacggcgaaagtggcaatttacttgataatatgctacatgctatcggaatttca
cgaaaaaataacgcttatattactaatacggtattttggcgtcctcctgctaatagacag
ccgacgttcgaagaagtcgatatttgtagaccttttgtcgagaagcatattgctcttatt
aacccgcagctaattattctagtcggtagcacggctgcaactagcttacttggaaaaaat
tcgggtattactaaaattagacaagaatattatttttataccaataaatatctatccgct
cctattcaaactacggcaatcttccaccctgcctatttactccgccaacctatgcaaaaa
cgcacctcttggtatgatttactcaagattaaggagtatttagtcaataatagacttctt
gcataa
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